Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01397 ATGGAGATATCGCAAGCGATGGACGCTCTGCGACAAAGAGCGACGTTCGTGAAGGAGTCACTTCACAAGAGCCAGACCATCACCGATAACATGGTCTCCATTCTCGGTTCCTTCGATCATCGTCTCTCCGCTCTCGAAACCGCCATGCGTCCCACTCAGATAAAAACGCATTCCATTCGTAGTGCACATGATAATATTGACAAGACTCTAAAAGCAGCAGAGGGGATTTTGACGCAATTCGACCAGACACGAATGGCGGAAGCTAAAATACTTCGAGGGCCGCACGAGGATCTAGAAAGCTATTTAGGAGCAATTGATCAGTTGAGGGCAAATGTCCGTTTCTTTAGCAGTAAAAAGAGCTTCAAAAGTAGCGAGGGTGTCATCAACCATGCTAATACCTTGCTTGCCAAAGCTATCTCAAAGTTAGAAGAGGAATTTAAACATCTTTTGACAAATTATAGTAAACCTGTGGAACCAGATCGCCTTTTTGAGTGCCTACCAAACTCTCTAAGGCCATCAAATTCTGGGAAGCACAGTGAGGGTGGTGGAAAAAACCATTCTGGAAAAAAAAGTTCAGAAGCTGTCGCTTTCTCACTCCCAACTCTCATTCCACCAAGAGTTATACCCTTGCTACATGATTTAGCACAACAAATGGTTCAAGCTGGTCATCAACAACAAATTTTTCGAATATACAGAGATACCCGAGCTACAGTCTTGGAACAAAGTCTTAGGAAGTTAGGTGTCGAAAGGTTGAGTAAGGATGATGTTCAAAAAATGCAATGGGAGGTTTTGGAGGCAAAGATTGGGAATTGGATTCATTACATGAGGATTGCTGTAAAATTGTTGATTTCTGGAGAGAAGAAAATTTGTGATGAAATATTTGATGGTGTGGACTCTTTGAGAACTCAATGTTTTGCTGAAGTCACTGCTAGTAGTGTGGCTATGCTTCTTAGTTTTGGAGAGGCTATTGCAAAAAGCAAGAGGTCACCTGAGAAATTATTTGTTCTTCTAGACATGTATGAGATAATGAGAGAACTCCAACCAGAGGTTGAGAGACTTTTTGAAAGTAAAGCATGCACTGAAATGAGAGAAGCTGCAATTAATTTGTCGAAGAGATTAGCTCAAACTGCCCAAGAAACCTTTGTTGATTTTGAGGAAGCAGTTGAAAAAGATGCCACTAAAACTACAGTAATGGATGGAACTGTCCACCCTTTAACTAGCTACGTGATCAATTACGTGAAGTTTCTATATGAGTGA 1257 0.4145 MEISQAMDALRQRATFVKESLHKSQTITDNMVSILGSFDHRLSALETAMRPTQIKTHSIRSAHDNIDKTLKAAEGILTQFDQTRMAEAKILRGPHEDLESYLGAIDQLRANVRFFSSKKSFKSSEGVINHANTLLAKAISKLEEEFKHLLTNYSKPVEPDRLFECLPNSLRPSNSGKHSEGGGKNHSGKKSSEAVAFSLPTLIPPRVIPLLHDLAQQMVQAGHQQQIFRIYRDTRATVLEQSLRKLGVERLSKDDVQKMQWEVLEAKIGNWIHYMRIAVKLLISGEKKICDEIFDGVDSLRTQCFAEVTASSVAMLLSFGEAIAKSKRSPEKLFVLLDMYEIMRELQPEVERLFESKACTEMREAAINLSKRLAQTAQETFVDFEEAVEKDATKTTVMDGTVHPLTSYVINYVKFLYE* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01397 418 PANTHER EXOCYST COMPLEX PROTEIN EXO70 57 417 IPR004140 GO:0000145|GO:0006887
Lapu4g01397 418 MobiDBLite consensus disorder prediction 165 190 - -
Lapu4g01397 418 SUPERFAMILY Cullin repeat-like 76 418 IPR016159 -
Lapu4g01397 418 Pfam Exo70 exocyst complex subunit 270 418 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lapu4g01397 418 Gene3D Exocyst complex component Exo70 75 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01397 Lapu-Chr4 31104314 31114255 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01397 1 418 EXO70 exocyst subunit family AT5G52340 77.804 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01397 K07195 - gmx:100779774 738.413