Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01395 ATGTTGAAATACAATGGTGGTCGACCCAAATCTGAGACAAAACTTAAAAGTGCTGTTCAGCTGCAAGACCTTTTAGATGCCACACGGATGCTGGTGCCTCGCACTAGACCAGATCTAGAAAGTGATAGTGAGGCTGAAGATATCGAGCATGCTGAAAAGCTTCGTCAAGTTAAAGCAGTTCTTGAAGAGGGAGGACATTTCTCTGGCATATATAGGAAAGTTCAACTAAAGCCACTAAAGTGGGTCAAAGTGACAAAAGGCAATGGTGAAGTTGAAGAACGACCTGTTCAAGCTCTTATGATTCTTAAATATGGTGGCGTTCTTACACACGCTGGCAGAAAACAGGCTGAAGAACTCGGAAGATATTTCCGGAATAAAATGTATCCAGGAGAAGGTACAGGGCTACTTCGCCTCCATAGTACATACCGTCATGATCTGAAGATTTACAGCTCTGACGAGGGTCGCGTGCAGATGTCTGCCGCTGCTTTTGCCAAAGGTCTTCTCGACCTAGAAGGGCAGCTAACTCCAATCCTGGTTTCCCTTGTTAGCAAGGACTCCTCCATGTTGGATGGGCTTGAAAATGCCAGCTCTGAAATGGAAGAAGCCAAGGCTCGCTTGAATGAAATTATTACGTGTAATGCTAAGACCGTTGATAGTAATGGATCACCTGAATTTCCTTGGGCGGTTGATGGTGCCGGTTTGCCACCCAATGCATCAGAATTGCTCTCCAATTTGGTAAAGTTGACTAAGAAGGTTACAGAACAAGTAAAACTACTTGCAAAGGATGAAAATGAGAAACTTACTGAAAGAAACTTATATGATATAATTCCTCCCTATGACCAAGCAAATGCGCTTGGTAAGACTAATATTGACGTTGACCGAATAGCTGCCGGATTACCCTGTGGTAGTGAAGGATTTCTATTGATGTATGCTCGATGGAAAAAGCTTGAAACAGACTTGTACAATGAACGCAAGGAACGCTATGATATCACCCAAATTCCTGATGTTTATGATTCATGCAAATATGATCTCTTGCACAATGCACATCTTAATCTAGAAGGACTTGATGAGCTTTTCAAAGTTGCTCAGATGCTTGCTGATGGTGTAATTCCAAATGAATATGGAATTAATCCAAAGCAGAAGCTGAAGATTGGCTCAAAGATTGCTCGTCGGTTGCTGGGGAAACTTTTGATTGATCTGAGGAACACTCGAGAAGAAGCCATTAATGTTATAAAGAATAACCAAGACCTTTCATTATCTGAAAAAATTAAGAAAGACGCAGAGGTCCACTCAAAACTATTCCATAAGAATGATGAAATAGATCAAGATGATGATGATGATAAAGAGACCAAATATCGTTTAGATCCAAAGTATGCAAATGTGAAGACACCTGACCGCCATGTGCGAACACGCCTATACTTCACATCAGAATCACACATACATTCTCTTATGAATGTTCTTCGTTACTGTAATTTGGATGAATCCCTTGAAGAAGAAGAAGAGGGTCTTGTCAGCCATAATGCTCTAGAGCGACTATCTAAAACAAAGGAGCTTGACTATATGAGCCACATTGTGCTTAGGATGTTTGAGAACACAGACGTGGCTTTAGAAGATCCTAGAAGGTACCGCGTAGAGCTGACCTACAGCCGTGGTGCCGATCTATCCCCCCTGGAGAAGGAAGGTAGCGAGTGCACTTCACTACACCAGGAGCACACACTGCCTATCATGTGTCCAGAGAGGCTGCAAGGAACAGGATCATATCTGACATTAGAAACCATGGAAAACATGATTCGTCCATTTGCTATGCCTGCAGAAGACTTTCCTCCAACACCTGCAGGATTTTCTGGCTACTTCTCAAAAAGCGTGCTTGATCGTCTCTCTTATAGTCATTCTATGCAAGAAATGGAGTTTAGAACCAACACAGTTTTGGTTGAGATGGCTGACAAGGAAGAAGCCATGCATGCTGTTTTGAAGGAAGCTGTGGATTTGGAAAACGTGCCACTTGAAGAGGTTTTCCAGACTCTGAGGTGTGATTCAAATGGACTCACAACAAAATCTGCTGAGGAGAGGTTGGCCATTTTTGGCCACAACAAACTTGAGGAGAAACAGGAGAGCAAGGTTTTGAAGTTTTTGGGATTTATGTGGAATCCTCTTTCATGGGTCATGGAAGCTGCAGCAATCATGGCCATTGCTTTGGCCAATGGAGGAGGCAAACCTCCTGATTGGCAAGACTTCGTTGGGATTATCACACTCCTTATTATCAATTCAACAATAAGTTTCATTGAGGAGAACAATGCTGGTAATGCCGCGGCAGCTCTGATGGCTCGTCTAGCACCTAAAGCTAAGGTCCTTCGAGATGGGAAATGGATTGAGGAGGATGCAAGTGTTCTTGTTCCAGGGGATATAGTTAGTGTCAAGCTAGGGGATATTATCCCTGCGGATTCTCGTCTACTTGAAGGTGATCCCTTGAAGATTGATCAGTCTGCACTTACAGGCGAGTCTCTTCCTGTCACAAAAGGCCCTGGTGATAGTGTTTATTCTGGTTCCACATGCAAGCAGGGAGAGATCAATGCAGTTGTTATCGCCACAGGAGTTCATACCTTCTTTGGCAAAGCTGCTCACCTTGTGGACTCTACAAATCAAGTTGGTCATTTTCAGAAGGTCCTGACTGCTATTGGGAACTTCTGCATATGTTCCATTGCTGTGGGAATGATAATAGAGATCATTGTCATGTACCCAATTCAACACCGACAATATCGTCCTGGGATTGACAATCTGCTTGTGCTTCTTATTGGAGGAATTCCCATAGCCATGCCTACTGTTTTGTCAGTGACAATGGCTATTGGATCCCATCGATTAGCTCAACAGGGTGCTATTACTAAAAGAATGACAGCCATAGAAGAGATGGCTGGAATGGATGTATTATGTAGTGACAAAACTGGAACTTTGACCTTAAATAAACTGTCTGTTGACAAGAATCTTATTGAGATTTTTGCTAAAGGAGTTGATGTAGATACAGTTGTTCTCATGGCCGCTCGGGCTGCACGATTGGAAAACCAAGATGCTATAGATGCTGCTGTTGTAGGAATGTTAGGTGATCCAAAAGAGGCAAGGGCTGGTATTCAAGAGGTTCACTTCCTTCCCTTCAATCCAACTGACAAGCGAACTGCCATGACTTATATAGACAGTGAAGGTAAAATGCATCGTGTCAGCAAGGGTGCACCAGAGCAGATTTTGAATCTTGCACGCAATAAGTCAGAGATAGAACGCAGAGTACATTCTGTCATTGATAAGTTTGCAGAGCGTGGCTTACGGTCTCTTGCAGTGGCTTACCAGGAAGTTCCCGATGGGATAAAAGAAAGCCAAGGAGGGCCTTGGCAATTTATTGGACTCTTGCCTCTGTTTGACCCGCCTAGACATGATAGTGCTGAGACAATACGAAGGGCATTGAATCTTGGAGTAAATGTTAAAATGATTACAGGCGATCAACTAGCAATAGGAAAAGAAACAGGGCGTCGTCTGGGAATGGGAACCAACATGTACCCTTCATCGGCTTTATTGGGCCAAAATAAGGATGAAGCAATTGCTACCTTGCCAGTTGATGAGTTGATAGAAAAAGCAGATGGATTTGCTGGTGTTTTTCCTGAACACAAATATGAGATTGTGAAACGTTTGCAAGCTAGGAAACACATATGTGGAATGACTGGTGATGGGGTTAATGATGCTCCTGCTCTTAAAAAGGCAGATATTGGAATAGCTGTCGCTGATGCTACTGATGCAGCTCGTAGTGCTTCTGACATTGTCCTAACTGAACCTGGTCTTAGTGTTATCATCAGTGCTGTATTGACTAGTCGAGCCATATTCCAAAGGATGAAGAATTACACGATCTATGCAGTTTCCATCACAATTCGTATTGTGCTTGGTTTCATGTTACTGGCCCTCATATGGCAATTTGATTTTCCACCGTTCATGGTGCTGATTATTGCTATTCTTAATGACGGTACCATTATGACTATATCAAAGGACAGGGTAAAACCATCTCCATATCCAGATAGCTGGAAGTTGGCGGAGATCTTCACTACTGGGATAATTCTTGGTGGTTATTTGGCTATGATGACAGTTATTTTCTTTTGGGCAGCATATAAAACAGATTTTTTCCCTCAAACTTTTGGAGTTGCAAGCCTTCAGAAAAAGGATAGGGATGACTATAGAAAGCTTGCATCAGCAATATACCTACAAGTTAGCACAATTAGTCAGGCTCTCATATTCGTTACACGAGCACGAAGTTGGTCTTATGTTGAACGACCGGGTTTGTTACTAGTCGCAGCTTTTGTTGTCGCCCAGCTAATAGCTACCTTGATTGCAGTTTATGCAAATTGGAGTTTTGCTGCGATTGAAGGGATTGGATGGGGTTGGGCTGGTGTTGTTTGGCTTTATAACCTCGTCTTTTACATGCCACTTGACTTTATTAAGTTCATAATTCGGTATGCCTTGAGTGGAAGGGCTTGGGATCTTGTTATTGAACAAAGGATTGCTTTTACAAGGAAAAAGAATTTTGGAAGGGAGGAACGTGAACTTAAATGGGCACATGCACAGAGAACACTCCATGGCCTTCATCCACCAGAGACTAAGATGTTCGGTGAACGAACAACTTACACAGAACTTAATCATATGGCTGAAGAAGCTAAAAGACGAGCAGAAATTGCAAGACTGAGAGAACTGCATACATTGAAGGGCCATGTTGAGTCTGTGGTTAGACTGAAGGGCCTTGACATTGATACAATACAGCAATCATACACTGTCTAG 4806 0.4276 MLKYNGGRPKSETKLKSAVQLQDLLDATRMLVPRTRPDLESDSEAEDIEHAEKLRQVKAVLEEGGHFSGIYRKVQLKPLKWVKVTKGNGEVEERPVQALMILKYGGVLTHAGRKQAEELGRYFRNKMYPGEGTGLLRLHSTYRHDLKIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLENASSEMEEAKARLNEIITCNAKTVDSNGSPEFPWAVDGAGLPPNASELLSNLVKLTKKVTEQVKLLAKDENEKLTERNLYDIIPPYDQANALGKTNIDVDRIAAGLPCGSEGFLLMYARWKKLETDLYNERKERYDITQIPDVYDSCKYDLLHNAHLNLEGLDELFKVAQMLADGVIPNEYGINPKQKLKIGSKIARRLLGKLLIDLRNTREEAINVIKNNQDLSLSEKIKKDAEVHSKLFHKNDEIDQDDDDDKETKYRLDPKYANVKTPDRHVRTRLYFTSESHIHSLMNVLRYCNLDESLEEEEEGLVSHNALERLSKTKELDYMSHIVLRMFENTDVALEDPRRYRVELTYSRGADLSPLEKEGSECTSLHQEHTLPIMCPERLQGTGSYLTLETMENMIRPFAMPAEDFPPTPAGFSGYFSKSVLDRLSYSHSMQEMEFRTNTVLVEMADKEEAMHAVLKEAVDLENVPLEEVFQTLRCDSNGLTTKSAEERLAIFGHNKLEEKQESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWIEEDASVLVPGDIVSVKLGDIIPADSRLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEINAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMIIEIIVMYPIQHRQYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDVDTVVLMAARAARLENQDAIDAAVVGMLGDPKEARAGIQEVHFLPFNPTDKRTAMTYIDSEGKMHRVSKGAPEQILNLARNKSEIERRVHSVIDKFAERGLRSLAVAYQEVPDGIKESQGGPWQFIGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDEAIATLPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPYPDSWKLAEIFTTGIILGGYLAMMTVIFFWAAYKTDFFPQTFGVASLQKKDRDDYRKLASAIYLQVSTISQALIFVTRARSWSYVERPGLLLVAAFVVAQLIATLIAVYANWSFAAIEGIGWGWAGVVWLYNLVFYMPLDFIKFIIRYALSGRAWDLVIEQRIAFTRKKNFGREERELKWAHAQRTLHGLHPPETKMFGERTTYTELNHMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIDTIQQSYTV* 1602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01395 1601 Pfam E1-E2 ATPase 777 956 - -
Lapu4g01395 1601 SUPERFAMILY HAD-like 972 1282 IPR036412 -
Lapu4g01395 1601 Pfam Cation transporter/ATPase, N-terminus 665 728 IPR004014 -
Lapu4g01395 1601 Gene3D - 779 863 - -
Lapu4g01395 1601 Gene3D - 973 1272 IPR023214 -
Lapu4g01395 1601 Coils Coil 1552 1572 - -
Lapu4g01395 1601 PRINTS P-type cation-transporting ATPase superfamily signature 1235 1254 - -
Lapu4g01395 1601 PRINTS P-type cation-transporting ATPase superfamily signature 826 840 - -
Lapu4g01395 1601 PRINTS P-type cation-transporting ATPase superfamily signature 1152 1162 - -
Lapu4g01395 1601 PRINTS P-type cation-transporting ATPase superfamily signature 976 990 - -
Lapu4g01395 1601 PRINTS P-type cation-transporting ATPase superfamily signature 1258 1270 - -
Lapu4g01395 1601 PRINTS P-type cation-transporting ATPase superfamily signature 1130 1141 - -
Lapu4g01395 1601 Gene3D - 73 608 IPR029033 -
Lapu4g01395 1601 SMART Cation_ATPase_N_a_2 662 734 IPR004014 -
Lapu4g01395 1601 SUPERFAMILY Calcium ATPase, transduction domain A 779 876 IPR008250 -
Lapu4g01395 1601 FunFam Plasma membrane ATPase 988 1135 - -
Lapu4g01395 1601 Gene3D - 1550 1601 - -
Lapu4g01395 1601 Pfam haloacid dehalogenase-like hydrolase 972 1249 - -
Lapu4g01395 1601 PANTHER CALCIUM-TRANSPORTING ATPASE 660 1534 - -
Lapu4g01395 1601 Gene3D - 988 1135 IPR023299 GO:0000166
Lapu4g01395 1601 CDD P-type_ATPase_H 681 1492 IPR006534 GO:0008553|GO:0016020|GO:0120029
Lapu4g01395 1601 CDD HP_HAP_like 106 197 IPR000560 -
Lapu4g01395 1601 SUPERFAMILY Calcium ATPase, transmembrane domain M 662 1498 IPR023298 -
Lapu4g01395 1601 FunFam Plasma membrane ATPase 1129 1283 - -
Lapu4g01395 1601 NCBIfam plasma-membrane proton-efflux P-type ATPase 681 1457 IPR006534 GO:0008553|GO:0016020|GO:0120029
Lapu4g01395 1601 ProSitePatterns E1-E2 ATPases phosphorylation site. 978 984 IPR018303 -
Lapu4g01395 1601 Gene3D - 741 1466 - -
Lapu4g01395 1601 Pfam Histidine phosphatase superfamily (branch 2) 49 549 IPR000560 -
Lapu4g01395 1601 SFLD C1.7: P-type atpase like 958 1286 - -
Lapu4g01395 1601 SUPERFAMILY Phosphoglycerate mutase-like 100 575 IPR029033 -
Lapu4g01395 1601 PRINTS H+-transporting ATPase (proton pump) signature 1411 1432 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu4g01395 1601 PRINTS H+-transporting ATPase (proton pump) signature 1092 1110 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu4g01395 1601 PRINTS H+-transporting ATPase (proton pump) signature 1207 1223 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu4g01395 1601 PRINTS H+-transporting ATPase (proton pump) signature 1266 1291 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu4g01395 1601 PRINTS H+-transporting ATPase (proton pump) signature 1235 1251 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu4g01395 1601 Coils Coil 189 212 - -
Lapu4g01395 1601 NCBIfam HAD-IC family P-type ATPase 1210 1324 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu4g01395 1601 NCBIfam HAD-IC family P-type ATPase 748 996 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu4g01395 1601 SFLD p-type atpase 958 1286 IPR044492 -
Lapu4g01395 1601 FunFam Plasma membrane ATPase 779 863 - -
Lapu4g01395 1601 FunFam ATPase 4 plasma membrane-type 1220 1466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01395 Lapu-Chr4 31033052 31083092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01395 646 1601 Primary Pumps ATPases AT5G62670 88.389 0.0 1739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01395 K01535 - gmx:100805218 1759.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g01395 4 31033052 31083092 Lapu4g01395 4 31033052 31083092 ECH