Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01386 ATGATGGAGGCTATGTTGTCTAGTCTTTATGGTCAAGACATAGATGATGAGAGAGTTACTACCATTTGCTCACAAGAGGACTTCTGTAATGAAAAGGATAGTAAGGAAGATAAACTCAATTCTGCTAAAGTTGAGATGGGTAAAGTGAAAGAAGAAAATGAAAGATTGAAGATGATGTTAGAAAAAGTTAAAAACGATTACCACTCTCTTCAACTTTGTTTCTTTGACATCCTTCATAGAGAAACTTCCGAGAAGGGTGTGGAAGATTCAGCTGTTTGCCCTGATGAAGTAGAGGAACCTAAAGTGTCACTATTTCTTGGAAGAAGCCCAAGAGAACCTAAAAAGGAGGGAATAATTGGTAACTCTAGCAAACTTAAAGAAAATGAAGGTTTGGAAACCAGCCTCACCCTTGGTTTAGACTCCAAAACTGTGTCTTTCAAGGAGCAGGTATCTGATATGAGTCCCAAGAACTTCTTAAAAGAACTTAAGGAAGAAGATTCAACGAATGAATCAGACAGAACCAAAGACGGAGGTGATGAAATTTCGGATCAAACACCCCCCACCAAGAGAGCCAGAGTTTGTGTGAGAGCTAGATGTGATACTCCCACGATGCATGATGGATGCCACTGGAGGAAATATGGACAGAAGGTAGCAAAAGGAAATCCATGTCCAAGAGCATACTATCGTTGCACACTAGCTCCAGCATGCCCAGTCAAGAAACAGGTTCAAAGATGTGCTGAGGACATGTCCATCTTAATCACCACATATGAAGGAACTCATAACCACCCAATTCCAGCTTCAGCCACAACCATGGTTTCCATCACTTCTGCTGCTGTTTCCATGTTGTTGTCAGGTTCCTCAACATCTCAGCCAACAGATCACAGTTATGCCACGTTTTCAAATTCTCCTCCGATGTTCAGTGGTGTGAATTTGAGTCTTTTAGATCAACCAAGAGCAAACCAAGCCTCGTTATCAACCTCTTCTTCACATTTGCTACCAAAAATCACTCTAGATTTGACTTCTGATTCATCCTTCTCATCAACTCATGTCCCTTGTTCACCTTCAAGGTTTGCTTCAAACCCAAGATTCCTTCCATTAAGTCTAAACTTTTGCTCCTCAAAGTCCAACATTCCACTATCCTTTTGGGGAAAGGGACTTCCTATCAATGGCACCACTATGTCTATTGACAAAACTCACTTCAAGCCATTCAATATGGGAAGCCAATTTCAAGAACATTTCTACCAACAGTGCGTCAAGAACCAAACTCCATTCAGGGAGGCTTTGGCAGAGACACTAACCAAAGAAATCAGCACAGACACAAATCTTCTGTCCGCCATAGCTGTTGCAGTTTCATCTATAAGGGGACAAGCATCAAACAGTTTGAACAAGGGTGATGGAGAGATTTTAGGTTCAGGATTGAGCCTAAAACTTGGATAG 1437 0.4134 MMEAMLSSLYGQDIDDERVTTICSQEDFCNEKDSKEDKLNSAKVEMGKVKEENERLKMMLEKVKNDYHSLQLCFFDILHRETSEKGVEDSAVCPDEVEEPKVSLFLGRSPREPKKEGIIGNSSKLKENEGLETSLTLGLDSKTVSFKEQVSDMSPKNFLKELKEEDSTNESDRTKDGGDEISDQTPPTKRARVCVRARCDTPTMHDGCHWRKYGQKVAKGNPCPRAYYRCTLAPACPVKKQVQRCAEDMSILITTYEGTHNHPIPASATTMVSITSAAVSMLLSGSSTSQPTDHSYATFSNSPPMFSGVNLSLLDQPRANQASLSTSSSHLLPKITLDLTSDSSFSSTHVPCSPSRFASNPRFLPLSLNFCSSKSNIPLSFWGKGLPINGTTMSIDKTHFKPFNMGSQFQEHFYQQCVKNQTPFREALAETLTKEISTDTNLLSAIAVAVSSIRGQASNSLNKGDGEILGSGLSLKLG* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01386 478 ProSiteProfiles WRKY domain profile. 199 265 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu4g01386 478 Pfam WRKY DNA -binding domain 206 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu4g01386 478 Coils Coil 32 66 - -
Lapu4g01386 478 MobiDBLite consensus disorder prediction 155 189 - -
Lapu4g01386 478 Gene3D WRKY domain 189 266 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu4g01386 478 MobiDBLite consensus disorder prediction 157 186 - -
Lapu4g01386 478 SMART WRKY_cls 204 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu4g01386 478 FunFam probable WRKY transcription factor 31 189 266 - -
Lapu4g01386 478 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 27 458 IPR044810 GO:0003700
Lapu4g01386 478 SUPERFAMILY WRKY DNA-binding domain 197 265 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01386 Lapu-Chr4 30941146 30943511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01386 46 470 WRKY Transcription Factor Family AT5G15130 39.195 4.46e-70 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu4g01386 WRKY 2.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01386 - - gmx:100819296 686.411