Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01382 ATGGGGAGCATTGCTGGTATTAGGGTTGGTTCTACAATTGGGGGCAAATCCAATGGAGAGAGAAACAACAAAGATGTTGTTCAAGGAAGAAATGTAAGTAATGATGATATTGATAGACACCAAGCAATTGCCCCAAGATCCTCATCCCACAAAAGGTCAAGTAGCCATGAAAGGTCGTGTGTTCCTGATCAAGAATTATTCGAAGCTTCTTTGCTTCTTCGAAGGTTCACCTTTCATGATCTTATGTTGGCAACGAGGACTTTTAAGGTTGAGGATTTTCATGATGAAGAGGGCTTCGGAACTTTGTTGAAAGGTTGGATCAATCCATATGGGAACTATGCAGCAAGACCTGGAAGAGGGATTCCAATTGCAGTGAAGGCACTCAACTTGAATGCATTTCAAGATCAGAAGGAATGGCTTGATGAAATTAATTATCTTAGTGAACTCCATCATTTAAACCTGGTTAAATTAGTAGGCTTTTGCCTTGAGGGTGACAAAAGGCTACTTGTATATGAGCATATATGTGAAGGAAGTTTAGAGAAGCATCTTTTCAAGAGTATGTTCTAA 567 0.3968 MGSIAGIRVGSTIGGKSNGERNNKDVVQGRNVSNDDIDRHQAIAPRSSSHKRSSSHERSCVPDQELFEASLLLRRFTFHDLMLATRTFKVEDFHDEEGFGTLLKGWINPYGNYAARPGRGIPIAVKALNLNAFQDQKEWLDEINYLSELHHLNLVKLVGFCLEGDKRLLVYEHICEGSLEKHLFKSMF* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01382 188 MobiDBLite consensus disorder prediction 1 59 - -
Lapu4g01382 188 PANTHER OS01G0588500 PROTEIN-RELATED 54 185 - -
Lapu4g01382 188 MobiDBLite consensus disorder prediction 15 30 - -
Lapu4g01382 188 Gene3D Phosphorylase Kinase; domain 1 63 173 - -
Lapu4g01382 188 SUPERFAMILY Protein kinase-like (PK-like) 56 187 IPR011009 -
Lapu4g01382 188 ProSiteProfiles Protein kinase domain profile. 88 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g01382 188 Pfam Protein tyrosine and serine/threonine kinase 99 185 IPR001245 GO:0004672|GO:0006468
Lapu4g01382 188 MobiDBLite consensus disorder prediction 31 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01382 Lapu-Chr4 30914081 30915812 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01382 70 184 Glycoside Hydrolase AT3G07070 40.870 1.76e-21 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lapu4g01382 PK_Tyr_Ser-Thr 3.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01382 - - vum:124826039 254.218