Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01379 ATGAGGATGAAAATTGCAATTGGTGCTGCAAATGGTCTTGCATTTTTACATGAGGAAGCATCAAGGCCAGTAATATTTCCAGATTTTAAGGCATCTAAGATCCTATTGGACATGGACTACAACGCAAAACTTTGGGACTTTAGTCTTGCTCGAGAAATTCATGTAACAACTAAAGTAGGAACAAAAGGTTATGAAGCCCCTGAGTATACGATGACAGGACACCTTACTTCTGAGAGCAACGTTTACAGCTTTGGGATTGTTCTGCTGGAAATACTGACAGGAAGAAGAGCCTTGGATCAAACAATGCCTCCAGAGGAACAACACCTGATAGAATGGTTGCGGCCTCATCTCAGAAACAAAGCAAATTTTCATTATTTAATGGACCCTAGACTTGAAGGCCAATACCCTACAAAATGTGCTCATAGGACAATGAGAATAGCTACTCATTGTCTTCGGCTAGACCCTAAAGCAAGACCCCTTATGAGTGAAGTAGTTCACAAGTTGAAGTATCTGCATGATGACATGGTTGGTGAGGTTGGTCCCTCAACCTCACTTGGGAGAATGGATGTCAGTGCTAACAAGTATGGCCTAGGAATAAGTTCATCATCACCAAAGGTTTTAAGGTGCTTTCAACCCTCACCACAGCGCCAATACTATCCTCTTCCTCTACCTCCAGCTCCACCTAACCCTAGGGTTGGATCTTCATCTAAATCCTAG 717 0.4268 MRMKIAIGAANGLAFLHEEASRPVIFPDFKASKILLDMDYNAKLWDFSLAREIHVTTKVGTKGYEAPEYTMTGHLTSESNVYSFGIVLLEILTGRRALDQTMPPEEQHLIEWLRPHLRNKANFHYLMDPRLEGQYPTKCAHRTMRIATHCLRLDPKARPLMSEVVHKLKYLHDDMVGEVGPSTSLGRMDVSANKYGLGISSSSPKVLRCFQPSPQRQYYPLPLPPAPPNPRVGSSSKS* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01379 238 SUPERFAMILY Protein kinase-like (PK-like) 2 173 IPR011009 -
Lapu4g01379 238 PANTHER OS01G0588500 PROTEIN-RELATED 1 171 - -
Lapu4g01379 238 ProSiteProfiles Protein kinase domain profile. 1 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g01379 238 MobiDBLite consensus disorder prediction 218 238 - -
Lapu4g01379 238 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 1 178 - -
Lapu4g01379 238 Pfam Protein kinase domain 6 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g01379 238 Gene3D Transferase(Phosphotransferase) domain 1 1 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01379 Lapu-Chr4 30880939 30883037 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01379 2 171 Glycoside Hydrolase AT3G07070 49.153 9.94e-54 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lapu4g01379 Pkinase 1.6e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01379 - - var:108344548 377.867