Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01367 ATGAGGAAGCGCCAAGTGGTTGTGAGAAGAGAGGAGCCTCAGAGAAGTATTAGGAGTGTGAAGTATGGTGAGTGCCAGAAGAATCATGCAGCAAATGTTGGAGGGTATGCTGTTGATGGTTGCAGAGAGTTTATGGCAAGTGGTGGAGAAGGGACAAGTGCTGCTCTCACGTGTGCTGCATGTGGCTGCCACAGGAACTTCCACAAGAGACAGGTTGAAACTGAAGTAGTGTGTGAGTGCTCCTCACCTCCCTCCAATGGCACATGA 267 0.5019 MRKRQVVVRREEPQRSIRSVKYGECQKNHAANVGGYAVDGCREFMASGGEGTSAALTCAACGCHRNFHKRQVETEVVCECSSPPSNGT* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01367 88 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 21 71 IPR006456 -
Lapu4g01367 88 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 22 71 IPR006456 -
Lapu4g01367 88 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 16 75 - -
Lapu4g01367 88 Pfam ZF-HD protein dimerisation region 20 72 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01367 Lapu-Chr4 30648866 30649184 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01367 1 87 Zinc finger-homeobox gene family AT3G28917 68.687 1.27e-42 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lapu4g01367 ZF-HD_dimer 5.1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01367 - - aprc:113868039 179.874