Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01364 ATGGCTGCTACATCATGTTCCTATGCATTCTCCTATGATGTGTTCCTCAGCTTTAGAGGGTCAGACACACGCCATGGTTTTGTTGGAAATCTTTACAAAGCTCTTCATGACAAGGGAATCCACACTTTCATTGATGATGAGAAGCTTCAGAGAGGAGATGAAATAACACCTACACTTATGAAGGCAATTGAAGAGTCTAGGATTGCCATCACCGTGCTCTCTCACAACTATGCTTCTTCATCCTTTTGTTTAGATGAACTTGTTAATATCATTGGTTGTTCCAATAAGAAAGGCTTGTTGCTTTTGCCTGTTTTTTATAACTTAGATCCTTCTGATGTAAGACGCCATAAAGGTAGCTATGGAGAAGCATTAACAAAGCATGAGGAAAAGTTCAGAGATAAGAAGGACAGTTTCAACCATAACATGGAGAGGTTGGAAAAATGGAAGATGGCTCTGCATCAAGTGGCTAACTTATCTGGCTATCATTTCAAACAAGGATATGAATATGAATATGAGTTTATTGGGAGGATTGTTGAGTTGGTCTCTAGCAAGATTAATAGAGCTCCTTTACATGTTGCGGATTACCCTGTTGGACTAGAGTCACAAATGCTAGAAGTAATGAAGCTCTTGGATCTTGGAACTGATGATGGTGTTCACATGATCGGGATCCATGGAATTGGTGGAATAGGAAAAACAACACTTGCTCTAGCAATTTATAATTTGGTTGTTGGGCATTTTGATGGTTTGTGTTTTCTTGAAAACGTGAGAGAAAACTCAGACAAGCATGGGTTGCAACATCTCCAAAGCATCCTTCTTTCTGAGTTGGTTAAAGAAAAGAAAATAAATATAGCAAGTGTGCAACAAGGAATTTCAATGATACAACATAGGCTCCAACGAAAGAAGGTTCTCTTGATAGTGGATGATGTTGACAAGCATGAGCAATTGCAGGCTATTGTTGGAAGATCTGATTGGTTTGGTTCCGGGAGCAGAATCATCATAACAACTCGAGATGAACAACTGCTAGCATCACATAAGGTTAAAAGAACATATGAGGTGAAGGAATTGAACAAGAATAATGCTCTTCAATTGCTTACATGGAAAGCTTTTAGAACTGACGAAGTTGATCCAAGTTATGAGGAGGTCTTGAACCGTGTGGTAGCTTATGCTTCGGGCCTTCCATTGGCTTTGGAAGTAATAGGTTCCAACTTGTTTGGAAAAAGTATAGAAGAATGGAAATCTGCTATCAAACAATATGAAAGAATTCCTAATAACCAAATCCTAAAGATACTTAAAGTAAGCTTTGATGCTTTGGAGGAAGAAGAGAAGAGTGTTTTTCTTGACATTGCTTGTTGCTTCAAAGGATATGAATTGGAAGAGGTCCAAGATATACTTCATGCTCATTATGGTGATTGCATGAAATACCATATTGGGGTGCTGGTTGATAAATCTCTCTTAAAGCTTAGTCTGCATGGTATGATGGTGACAATGCATGACTTGGTAGAGGACATGGGTAAAGAAATTGTACGACAGCAGTCACCAAAAGATCCAGGGAAGCGTAGCAGATTATGGTTTCATGAGGATATAATTCAAGTTTTAGAAGACAACATAGGAACTAGTGAAATTGAAATCATATGCTTGGATTTCCCCTTACTTGACAAAGAAGAACTAGTAGAATGGAACAGAAAGGCCTTCAAGAAGATGAGAAACCTCAAAACACTAATTATTAAAAGTGGTAATTTTTCCAAAGGTCCCAAATATCTTCCAAATAGTCTGAGAGTACTAGAATGGTGGAGATTTCCTTCACATGATTTACCATCCGATTTTCATTCAAAGAAACTTGCCATGTGCAAGTTACCTCAGAGTTGCTTTACATCACCTGAGTTGGTTGGCTTATTGAAGAAGTTCATGAGTATGAGATTTTTAAATTTGGACAAAAACAAGTGTTTAACACAGATACCTGATGTATCTGGTCTCCCAAATTTAGAGAAACTTTCATTTCAACATTGTCAGAATCTAACTACAATTCACAATTCCATTGGATTTCTTTATAAACTCAAAATATTGAGTGCTTTTGGTTGCACCAAGCTTGTGAGTTTTCCACCTATTAAGTTGATTGCTCTTGAAAAGCTCAAACTCTCACGTTGTTATAGTCTTGAGACTTTTCCAGAAATATTAGGAAAGATGGAAAACATAAGGGAACTTCAGTTGGAGTACACTGCCATAAAAGAATTGCCATATTCTTTTCAAAATCTTACACGGCTTCAAGAGTTACAACTGTCTAATTGTGGAGTTGTTCAGTTACCAAGTAGCATTGTTATGATGCCAGAACTGTCTGATCTTATTGGTTGGAAATGGAAAGGCTGGCAATGGCTAAACCAGGAAGAGGATGAAGAAAAAAAGGGATCATCTATAGTATCTTCAAATGTAGAATGTCTTTGGGCCTCAGAATGCAACCTGTGTGATGATTTCTTTTCAATCGGTTTCATGCAGTTTGCCCATGTGAAAGACTTAGACCTATCAAAGAATAATTTCACAATCCTACCTGAATGCATCAAAGAGTTTCAATTTTTAAGGAAGCTTAATGTAAATGATTGCAAGCTTCTTCAGGAAATTGGAGGGATTCCACCAAGCTTGAAACATTTCTTAGCAACAAACTGTAAATCCTTGACTTCCTCAAGTACAAGCATGTTCCTAAATCAGGAGCTGCATGAGGCTGGAAAAACTCAGTTTTATTTACCAGGAGAAAGGGTTCCAGAATGGTTTGATCACCAAAGCATGGGACCTTCAAATTCTTTCTGGTTTCGTAATAGGTTCCCTGAAAAGATTCTTTGTCTTGTTGTTGGACCTATGGATAATGACTCTGGAATGTTTAGGCCTATGGTGGTCATCAATGGCAAGAAATGTTTCCTTGGTAGTGGCTATTTCATGATGGGAAGGGATCATACATATATTTTTGATCTTCAAACGATAGAGTTTGAAGATAATATATATGGAGTTCCTTTAGAAAATGAATGGAACCATGCAGAGGTTACATATGTAGGTTTGGAAGAGACATCAATCCTTAAAGAAAGTGGAATCCGTGTTTTCAAACAAGAAAGTAGCATGGAGGATATTTGGTTTTCTAATCCTCATGGCAAGAGAAAATTAGAAGATGATCTCAATAGTTTGGAATCACAAAACCAACAATTGCTAAAAAAGCATAGGTTTGTGGGCATGGAAGCTTTATAA 3228 0.3745 MAATSCSYAFSYDVFLSFRGSDTRHGFVGNLYKALHDKGIHTFIDDEKLQRGDEITPTLMKAIEESRIAITVLSHNYASSSFCLDELVNIIGCSNKKGLLLLPVFYNLDPSDVRRHKGSYGEALTKHEEKFRDKKDSFNHNMERLEKWKMALHQVANLSGYHFKQGYEYEYEFIGRIVELVSSKINRAPLHVADYPVGLESQMLEVMKLLDLGTDDGVHMIGIHGIGGIGKTTLALAIYNLVVGHFDGLCFLENVRENSDKHGLQHLQSILLSELVKEKKINIASVQQGISMIQHRLQRKKVLLIVDDVDKHEQLQAIVGRSDWFGSGSRIIITTRDEQLLASHKVKRTYEVKELNKNNALQLLTWKAFRTDEVDPSYEEVLNRVVAYASGLPLALEVIGSNLFGKSIEEWKSAIKQYERIPNNQILKILKVSFDALEEEEKSVFLDIACCFKGYELEEVQDILHAHYGDCMKYHIGVLVDKSLLKLSLHGMMVTMHDLVEDMGKEIVRQQSPKDPGKRSRLWFHEDIIQVLEDNIGTSEIEIICLDFPLLDKEELVEWNRKAFKKMRNLKTLIIKSGNFSKGPKYLPNSLRVLEWWRFPSHDLPSDFHSKKLAMCKLPQSCFTSPELVGLLKKFMSMRFLNLDKNKCLTQIPDVSGLPNLEKLSFQHCQNLTTIHNSIGFLYKLKILSAFGCTKLVSFPPIKLIALEKLKLSRCYSLETFPEILGKMENIRELQLEYTAIKELPYSFQNLTRLQELQLSNCGVVQLPSSIVMMPELSDLIGWKWKGWQWLNQEEDEEKKGSSIVSSNVECLWASECNLCDDFFSIGFMQFAHVKDLDLSKNNFTILPECIKEFQFLRKLNVNDCKLLQEIGGIPPSLKHFLATNCKSLTSSSTSMFLNQELHEAGKTQFYLPGERVPEWFDHQSMGPSNSFWFRNRFPEKILCLVVGPMDNDSGMFRPMVVINGKKCFLGSGYFMMGRDHTYIFDLQTIEFEDNIYGVPLENEWNHAEVTYVGLEETSILKESGIRVFKQESSMEDIWFSNPHGKRKLEDDLNSLESQNQQLLKKHRFVGMEAL* 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01364 1075 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 448 IPR027417 -
Lapu4g01364 1075 SMART till_3 11 158 IPR000157 GO:0007165
Lapu4g01364 1075 Coils Coil 1046 1066 - -
Lapu4g01364 1075 SUPERFAMILY L domain-like 510 895 - -
Lapu4g01364 1075 Gene3D - 184 350 IPR027417 -
Lapu4g01364 1075 PRINTS Disease resistance protein signature 220 235 - -
Lapu4g01364 1075 PRINTS Disease resistance protein signature 296 310 - -
Lapu4g01364 1075 PRINTS Disease resistance protein signature 749 765 - -
Lapu4g01364 1075 PRINTS Disease resistance protein signature 389 403 - -
Lapu4g01364 1075 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 161 IPR035897 -
Lapu4g01364 1075 Gene3D - 354 438 IPR042197 -
Lapu4g01364 1075 FunFam Disease resistance protein (TIR-NBS-LRR class) 9 187 - -
Lapu4g01364 1075 Pfam NB-ARC domain 202 424 IPR002182 GO:0043531
Lapu4g01364 1075 Gene3D - 6 183 IPR035897 -
Lapu4g01364 1075 SUPERFAMILY "Winged helix" DNA-binding domain 425 533 IPR036390 -
Lapu4g01364 1075 ProSiteProfiles TIR domain profile. 10 185 IPR000157 GO:0007165
Lapu4g01364 1075 Pfam TIR domain 12 187 IPR000157 GO:0007165
Lapu4g01364 1075 Pfam Leucine rich repeat 707 762 IPR001611 GO:0005515
Lapu4g01364 1075 Gene3D Ribonuclease Inhibitor 799 907 IPR032675 -
Lapu4g01364 1075 Gene3D Ribonuclease Inhibitor 537 793 IPR032675 -
Lapu4g01364 1075 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 808 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01364 Lapu-Chr4 30578264 30582510 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01364 7 780 WRKY Transcription Factor Family AT4G12020 31.358 1.38e-80 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01364 - - gmx:100780257 1844.32