Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01350 ATGTCAGAAGCAGAAGAAAGGAAGAACATGGAGGAAGAGGTGGTGGCGGAGACAGAGAAGAAGCAGCCGAAGCTGAAAGAGAGAAAGGTATCATGGGCAAAACTAAGACGCATAGATTCTCTCAATTTAGAAGCAGGAAGAGTTTCTATGGTTGCACATAATCCTTTCAAGATGGGCTGGAGGACAACACTGAGCTTAGCATTTCAAAGCATAGGGGTTGTGTATGGTGATATTGGAACGTCACCCCTTTATGTGTATGCCAGCACTTTCACTAAGGAAATCAAAAACCATGATGACATTCTCGGTGTCTTGTCTCTCATCATCTACACCATCATTCTCATACCTTTGTTCAAATACGTATTCATCGTACTGTGGGCCAACGATAATGGAAATGGTGGAGCTTTTGCACTGTATTCATTGATATGTAGGCACATAAAGATGAGTTTGATTCCAAACGAACAACCAGAGGACAGAGAACTTTCTAACTACAAACTTGAAACACCTTCCACTCAGGTGAAACGAGCTCACAAACTCAAGCAGAAGCTCGAGGGAAGTCCTGTTGCACGCATTGTGCTTCTGCTTCTTGCCATAATGGGAACTTCCATGGTCATAGGAGATGGGATTCTTACTCCATCAATTTCAGTTCTTTCAGCAGTAAGTGGGATCAGTAAATCATTAGGTCAAGATGCTGTTGTGGGAATCACAATAGCAATTTTGATAGTCCTATTCTATGTGCAACGATTCGGTACAGATAAAGTGGGATTCTCATTCGCTCCAATCATTTTGGTGTGGTTTTTGTTCATCAGTGGAATTGGGTTTTACAATTTATTCAAATATGACATTGGAGTACTACGTGCCTTTTATCCAAAATATATATATGATTACTTCAGACGGAATGGCAAGGATGGATGGTTATCGCTTGGTGGAGTGTTTTTGTGCATAACAGGATCTGAGGCCATGTTTGCTGACTTGGGTCACTTTAATGTACGATCCATTCAAATCAGCTTTTCTTGCATTACATGTCCAGCAATAGTGGTTGCATACATTGGACAAGCTGCGTATCTACGGAAGTTCCCTGAGAATGTGGCTAATACTTTCTATGATAGTATTCCGGATCCCTTGTATTGGCCAACATTTGTTGTGGCTGTTGCTGCTGCCATCATAGCTAGCCAAGCAATGATTTCAGGAGCATTCTCCATTATATCCCAGGCCCTAAGTCTGGGTTGTTTCCCAAGAGTTAGGGTAGTGCACACTTCTGTCAAACATCAGGGTCAAGTGTACATTCCTGAGGTCAACTACATGTTCATGATCGCATGTATTGTGGTGTGTGCTGCCTTCAAGACCACAGAAAAGATTAGTCATGCATATGGGATTGCAGTTATTGGTGATATGATGATCACAACAACTCTGGTTTCGCTGATAATGCTTGTTTTATGGAAAAAGAGTCTATGGAAAGTGGCTTTGTTCTTCTTGGGATTCGGTTTCATAGAGATAGTTTATTTCTCATCTCAACTAACCAAGTTCACCGGAGGAGGGTATCTTCCAATTGTATCAGCCATGTTCTTGACGACAGTGATGGGAATCTGGCATTATGTGCACAAAGAAAGGTACATGTTTGAACTGAAAAACAAGGTATCGAGTGCGTATCTGAATGAAGTGGCGAACAATCCAGACGTAAGGCGAGTACCAGGAATCGGACTGTTGTATTCTGAACTGGTGCAAGGCATTCCTCCTATATTCCCACATCTCATAGGTAGCATTCCATCTATCCATTCAATTGTTGTGTTTGTGTCCATTAAGGCTATTCCAGTGAGTAGTGTTGCATCAGAGGAGAGGTTCTTGTTTAGGCAAGTGGAGCCCAGAGAGTACAGAGTGTTTAGGTGTGTTGTGAGGCATGGTTACAACGACGTGCTTGAAGATCCTGCAGAGTTTGAGTCACAGCTGATACAAAATCTGAAGGCATTCATTCAGCAAGAGAACTATTACACGGTGGAGGTGGAGGGAACTGGAAGTGCCACCGAACAAGCACCGGTGGCTGAGAGTGGTGATAAGAAGGAAACACTTCGTTCCTCCAGCAGAATAATCCCAAATCAATCTGCATCAGCCTCATCAGACTCCATTAGATCATTGGGGGGGAGTGCCACCAACAAGTCTTCTGCTAACATTTTTGCCCCACCCATTCAAGGAGCTGAAGATGAACTCAAATTCATAGACAAAGCATTGGAGAAGGGTGTGGTGTATATGCTGGCAGAAGCAGAGGTTGTGGCTCACCCAAACTCCTCCATCTTCAATAAGATTGTTGTCAATTATGTGTACAGTTTCTTCCGAAAGAACTTCAGACAAGGCCAGAATTCCATGGCAATCCCACGCAACAGACTTCTCAAGGTTGGAATGACATACGAAATATGA 2409 0.4292 MSEAEERKNMEEEVVAETEKKQPKLKERKVSWAKLRRIDSLNLEAGRVSMVAHNPFKMGWRTTLSLAFQSIGVVYGDIGTSPLYVYASTFTKEIKNHDDILGVLSLIIYTIILIPLFKYVFIVLWANDNGNGGAFALYSLICRHIKMSLIPNEQPEDRELSNYKLETPSTQVKRAHKLKQKLEGSPVARIVLLLLAIMGTSMVIGDGILTPSISVLSAVSGISKSLGQDAVVGITIAILIVLFYVQRFGTDKVGFSFAPIILVWFLFISGIGFYNLFKYDIGVLRAFYPKYIYDYFRRNGKDGWLSLGGVFLCITGSEAMFADLGHFNVRSIQISFSCITCPAIVVAYIGQAAYLRKFPENVANTFYDSIPDPLYWPTFVVAVAAAIIASQAMISGAFSIISQALSLGCFPRVRVVHTSVKHQGQVYIPEVNYMFMIACIVVCAAFKTTEKISHAYGIAVIGDMMITTTLVSLIMLVLWKKSLWKVALFFLGFGFIEIVYFSSQLTKFTGGGYLPIVSAMFLTTVMGIWHYVHKERYMFELKNKVSSAYLNEVANNPDVRRVPGIGLLYSELVQGIPPIFPHLIGSIPSIHSIVVFVSIKAIPVSSVASEERFLFRQVEPREYRVFRCVVRHGYNDVLEDPAEFESQLIQNLKAFIQQENYYTVEVEGTGSATEQAPVAESGDKKETLRSSSRIIPNQSASASSDSIRSLGGSATNKSSANIFAPPIQGAEDELKFIDKALEKGVVYMLAEAEVVAHPNSSIFNKIVVNYVYSFFRKNFRQGQNSMAIPRNRLLKVGMTYEI* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01350 802 MobiDBLite consensus disorder prediction 691 716 - -
Lapu4g01350 802 MobiDBLite consensus disorder prediction 672 716 - -
Lapu4g01350 802 Coils Coil 1 21 - -
Lapu4g01350 802 MobiDBLite consensus disorder prediction 1 22 - -
Lapu4g01350 802 Pfam K+ potassium transporter 67 636 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lapu4g01350 802 NCBIfam potassium uptake protein 66 802 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lapu4g01350 802 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 59 801 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01350 Lapu-Chr4 30332395 30337396 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01350 17 802 Inorganic Solute Cotransporters AT4G13420 59.542 0.0 969
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01350 K03549 - gmx:100814313 1353.58