Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01333 ATGATGGAGGATAGGATGAAGAAGAGGGTATTTTCTCCACCCATTGTGCTTCTCTTTCTAGCCTTTTCCCTTCTTCTCATGCTTCCAGAAGCTTCTGCTACAAAGTTTACTGTTGGAAACAACCAGTTTTGGAACCCCAATATTAACTACACTGAATGGGCCAAAGGAAAACATTTCTACCTTGGAGATTGGCTCTATTTTGTTTACGACCGGAACCAAGCGAATGTGCTGGAAGTGAACAAGACCGATTATGAGACTTGTAATTCCGATCATCCACTCCAAAACTGGACCAGGGGTGCAGGCAGAGATGTGGTTCCACTAAATGTAACCAAAACTTACTACATCATCAGTGGCAAAGGGTTCTGCTTCAGTGGCATGAAGGTGGCTGTTCATGTTGAAAAGCTACCACCTCCACCAAAAGCTGCTCCAGTAAAATCCAGCGCACCAACCCTCTTCTCCACTGGCCACATTCTTCTCATGCCGGTTGTTTTCGCCATCGGAACAGCGTGGGATGCATTCATTCATTTCTGGTAG 534 0.4551 MMEDRMKKRVFSPPIVLLFLAFSLLLMLPEASATKFTVGNNQFWNPNINYTEWAKGKHFYLGDWLYFVYDRNQANVLEVNKTDYETCNSDHPLQNWTRGAGRDVVPLNVTKTYYIISGKGFCFSGMKVAVHVEKLPPPPKAAPVKSSAPTLFSTGHILLMPVVFAIGTAWDAFIHFW* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01333 177 PANTHER BLUE COPPER PROTEIN 33 141 IPR039391 GO:0009055
Lapu4g01333 177 SUPERFAMILY Cupredoxins 33 132 IPR008972 -
Lapu4g01333 177 Gene3D - 32 135 IPR008972 -
Lapu4g01333 177 ProSiteProfiles Phytocyanin domain profile. 34 134 IPR003245 GO:0009055
Lapu4g01333 177 Pfam Plastocyanin-like domain 44 126 IPR003245 GO:0009055
Lapu4g01333 177 FunFam Lamin-like protein 32 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01333 Lapu-Chr4 30197159 30200438 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01333 11 177 Phytocyanin Superfamily AT5G15350 59.763 1.76e-71 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01333 - - gmx:100305564 305.449