Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01301 ATGTTTTCTGCTGTTTCTCTTACTTCTTCTTCATCTCCTTCTTCTTCTTTGTCTTCTTCTTCTTCTTCTTGTTATTCTTGTTCTTCTCCTTCTTCTTCTCATTGCGGTTCAGTGATCAAATGGAATTCACTTGTGCGATTTCTCTTCCTTGTCTTCGTGGTTCTCTTCATGTCGCAAAACGGCGCCGTTGCGATCGATTCGGACAAGTCCGCGCTCCTCAGTATGAAGGCGTCGTTGTCCGACCCCGCCGGCGTTCTGTCCACGTGGTCCACCGGCGACGGTTCTGACTACGGCTACTGCCACTGGTCCGGTGTCCTCTGCGACGCGAACTCCCGCGTCGTCGCCGTCAACGTCACCGGAAACGGCGGCAACCGAGCCTCGCACCCGTGCTCTGATTCATCCAAATTCCCCCTCTACGGTTTCGGAATTCGGCGAACATGCCAAGGTAGTAAAGGTTCTCTCTTTGGAAACGTTTCCTCTTTTAATTTCAATTTCATCAGCGAGCTTACGGAGCTTAGGGTTTTGTCTCTCCCCTTCAACGCGTTGAAGGGGGAAATCCCCGAAGCAATTTGGGGCATGGAAAAGCTAGAGGTTCTCGATTTAGAAGGGAACTTGATAAGTGGCTATCTTCCCTTGAGAATTAACGGCTTGAGGAAGTTGAGGGTTCTGAATCTTGGGTTTAATAGGATTGTTGGGGAGATTCCCAGTTCAATTTCGTCTCTTGAGAGTTTGGAGGTTTTGAATTTGTCTGGTAATGAATTGAATGGTTCTGTGCCTGGTTTTGTTGGGAGACTTAGAGGGGTGTATCTTTCGTTTAATCAGCTCGGTGGGGTTATTCCGCGAGAGATTGGGGAGAATTGTTGGAAGCTTGAGCATTTGGATTTGTCTGCGAATTCGTTGGTTGAAGGGATTCCGGTGAGTTTGGGGAATTGTGGGAGGTTAAAGACGCTTTTGCTGTATTCGAATATGTTGGAAGAGGGAATTCCTGGTGAGCTTGGGAAGCTTAAGAGTCTTGAGGTGTTGGATGTTTCCAGGAACACTCTCAGTGGCTCTGTGCCGAGGGAGCTTGGGCATTGCTCTGAGTTGTCGGTTCTTGTTCTGTCAAATCTATTTGATGTGCGCGGGGATGCTGTCGGTGATTTTGGGAACTTGGGCTCAGTGAATGATCAGGTGAATTATTTTGAAGGGTCAATTCCGGTGGAGGTTTTTTCACTTCCAAAGTTGAGGATATTATGGGCTCCCATGGTGAATTTAGAAGGCAGTTTCGAGGGGAATTGGGGTGGTTGTCAGAGCTTGGAGATGGTAAATTTGGCTCAGAATTTTTTCAGTGGGGAAATTCCGAACCAGCTTGGTGTCTGCAAGAAGCTGCATTTTCTTGACTTAAGTGGAAACAACCTTACTGGGGTGCTTACTGAAGAACTTCACGTTCCCTGTATGAGTGTGTTTGATGTTAGTGGGAACATGTTATCTGGTTCAGTTCCTGATTTCTCCAATACCGTTTGTCCCCCTGTTCCTTCCTGGAATGGAGACCTGTTTGAAGATGGGAATGTTTTCTCCACATATGCCTCGTTTTTTGCGTCAATGGTTCGTGAAAGATCTCTTTTCACAGCAATGGGGGGAACTGGTACTTCTGTTGTTCACAACTTTGGGCAAAACTGCTTTAGTGGCATTCAGTCGCTACCTGTACCACATGACAGGTCTGGGAAGAAGAACGATTACACGTTTCTTGTTGGTGGAAATAATCTTACCGGATCATTTCCTACATATTTATTTGAGAAATGTGATGGATTAGATGCATTACTTTTAAATGCCAGTTATAATAAGATATCTGGTCATATACCTTCCAATATCAGTGGCTTGTGCAGATCATTGAAATTTTTGGATGTATCAGGAAATCAACTTTCAGGACCGATTCCTGTTGATTTAGGGAATATGGTCTCGCTTGTATCGCTGAACCTCAGTAGGAATCAGTTACAAGGTCAGATTCCCACCAGCCTTGGCCAGATGAAGAATCTGAAGTTTCTCTCCTTGGCTGGTAATAAGTTAAATGGCTCAATTCCTACCAGCATTGGGCAGTTGTACTCTTTGGAAGTCTTCGACCTTTCTTTGAACTCTCTTACTGGTGAGATTCCAAAGGCTATTGTGAACATGAGAAATTTGACTGATGTTTTTCTCAATAACAACAATCTCTCTGGTCATATTCCTGATGGTTTGGCATATGTCAATTCACTCTCAGCATTCAATGTGTCTTTCAACAACTTATCTGGATATTTGCCTTCCAACAGTGGCTTGTTTAAATGCAGCAGTGCTGTTGGAAATCCATACCTAACTCCCTGCCGTGGAGTTTCTCTGACTGTGCCATCAGGGAATCAGCTAGGGCCGCTTGATAGCAACTCTTATAATACAGAAACAGAACAAGCTACTAGCAAGAAGAGTGGGAATGACTTCAGTTCTATTGAAATAGCATCTATAACTTCTGCTTCAGCCATTGTTTCTGTACTTATAGCCCTGATTGTTCTATTCTTTTACACACGGAAGTGGAAGCCGAGGTCCAGGGTTGTTGGCTCTACAAGAAAAGAAGTTACAGTGTTTACTGATATTGGGGTCCCATTGACGTTTGAAACTGTTGTCCAAGCCACAGGAAATTTCAATGCTGGCAACTGTATTGGGAGTGGAGGTTTTGGGGCAACATATAAGGCAGAGATAGCATCAGGAATCCTGGTGGCAGTCAAACGTCTTGCAGTTGGACGTTTCCAAGGTGTTCAACAATTCCATGCAGAGATCAAGACCCTTGGGAGGCTTCATCATCCAAATCTTGTCACTTTGATTGGTTATCATGCTTGTGAAACAGAGATGTTTCTCATATACAACTATTTGCCAGGTGGTAATCTCGAAAAGTTTATCCACGAGAGGTCCACGAGGGCTGCAGACTGGAGAATTCTTCACAAGATTGCATTGGACATTGCCCGAGCACTTGCCTATCTGCATGATCAGTGTGTTCCCCGTGTTCTTCATCGTGATGTCAAGCCCAGCAACATCTTGTTAGATGACGATTTAAATGCATATCTATCGGACTTCGGATTGGCTAGACTTCTGGGAACCTCAGAGACTCATGCTACAACTGGTGTAGCCGGAACATTTGGGTATGTTGCTCCTGAGTATGCAATGACTTGCCGTGTGTCTGATAAGGCTGATGTGTATAGCTATGGTGTGGTGCTTCTGGAGTTGCTCTCAGACAAGAAGGCATTGGATCCTTCATTTTCTTCTTTTGGAAATGGGTTCAACATAGTGGCATGGGCATGCATGCTGCTGAAGCAAGGAAGGGCAAATGAGTTCTTCACTGCAGGGTTATGGGAAGCAGGACCTGGAGAGGATTTGGTAGAGGTCCTTCACTTGGCAATTGTGTGTACTGTTGATTCTCTCTCTACCAGACCAACAATGAAACAAGTTGTCAGAAGGCTTAAGCAACTTGAACCCCCATCATGCTAG 3489 0.4503 MFSAVSLTSSSSPSSSLSSSSSSCYSCSSPSSSHCGSVIKWNSLVRFLFLVFVVLFMSQNGAVAIDSDKSALLSMKASLSDPAGVLSTWSTGDGSDYGYCHWSGVLCDANSRVVAVNVTGNGGNRASHPCSDSSKFPLYGFGIRRTCQGSKGSLFGNVSSFNFNFISELTELRVLSLPFNALKGEIPEAIWGMEKLEVLDLEGNLISGYLPLRINGLRKLRVLNLGFNRIVGEIPSSISSLESLEVLNLSGNELNGSVPGFVGRLRGVYLSFNQLGGVIPREIGENCWKLEHLDLSANSLVEGIPVSLGNCGRLKTLLLYSNMLEEGIPGELGKLKSLEVLDVSRNTLSGSVPRELGHCSELSVLVLSNLFDVRGDAVGDFGNLGSVNDQVNYFEGSIPVEVFSLPKLRILWAPMVNLEGSFEGNWGGCQSLEMVNLAQNFFSGEIPNQLGVCKKLHFLDLSGNNLTGVLTEELHVPCMSVFDVSGNMLSGSVPDFSNTVCPPVPSWNGDLFEDGNVFSTYASFFASMVRERSLFTAMGGTGTSVVHNFGQNCFSGIQSLPVPHDRSGKKNDYTFLVGGNNLTGSFPTYLFEKCDGLDALLLNASYNKISGHIPSNISGLCRSLKFLDVSGNQLSGPIPVDLGNMVSLVSLNLSRNQLQGQIPTSLGQMKNLKFLSLAGNKLNGSIPTSIGQLYSLEVFDLSLNSLTGEIPKAIVNMRNLTDVFLNNNNLSGHIPDGLAYVNSLSAFNVSFNNLSGYLPSNSGLFKCSSAVGNPYLTPCRGVSLTVPSGNQLGPLDSNSYNTETEQATSKKSGNDFSSIEIASITSASAIVSVLIALIVLFFYTRKWKPRSRVVGSTRKEVTVFTDIGVPLTFETVVQATGNFNAGNCIGSGGFGATYKAEIASGILVAVKRLAVGRFQGVQQFHAEIKTLGRLHHPNLVTLIGYHACETEMFLIYNYLPGGNLEKFIHERSTRAADWRILHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDLNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSFGNGFNIVAWACMLLKQGRANEFFTAGLWEAGPGEDLVEVLHLAIVCTVDSLSTRPTMKQVVRRLKQLEPPSC* 1163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01301 1162 MobiDBLite consensus disorder prediction 1 20 - -
Lapu4g01301 1162 Gene3D Transferase(Phosphotransferase) domain 1 959 1158 - -
Lapu4g01301 1162 ProSitePatterns Protein kinases ATP-binding region signature. 889 911 IPR017441 GO:0005524
Lapu4g01301 1162 SUPERFAMILY L domain-like 576 762 - -
Lapu4g01301 1162 Pfam Leucine rich repeat N-terminal domain 66 108 IPR013210 -
Lapu4g01301 1162 Pfam Protein kinase domain 886 1084 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g01301 1162 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 959 1161 - -
Lapu4g01301 1162 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 376 470 - -
Lapu4g01301 1162 SUPERFAMILY Protein kinase-like (PK-like) 865 1154 IPR011009 -
Lapu4g01301 1162 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 331 1156 - -
Lapu4g01301 1162 Gene3D Ribonuclease Inhibitor 63 263 IPR032675 -
Lapu4g01301 1162 SMART serkin_6 883 1157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g01301 1162 SMART LRR_typ_2 335 359 IPR003591 -
Lapu4g01301 1162 SMART LRR_typ_2 169 193 IPR003591 -
Lapu4g01301 1162 SMART LRR_typ_2 645 668 IPR003591 -
Lapu4g01301 1162 SMART LRR_typ_2 717 741 IPR003591 -
Lapu4g01301 1162 SMART LRR_typ_2 289 311 IPR003591 -
Lapu4g01301 1162 SMART LRR_typ_2 669 693 IPR003591 -
Lapu4g01301 1162 SMART LRR_typ_2 241 263 IPR003591 -
Lapu4g01301 1162 SMART LRR_typ_2 217 240 IPR003591 -
Lapu4g01301 1162 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 542 784 - -
Lapu4g01301 1162 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 847 958 - -
Lapu4g01301 1162 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 280 371 - -
Lapu4g01301 1162 SUPERFAMILY RNI-like 163 489 - -
Lapu4g01301 1162 Gene3D Ribonuclease Inhibitor 546 789 IPR032675 -
Lapu4g01301 1162 Gene3D Ribonuclease Inhibitor 264 374 IPR032675 -
Lapu4g01301 1162 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1003 1015 IPR008271 GO:0004672|GO:0006468
Lapu4g01301 1162 CDD STKc_IRAK 889 1157 - -
Lapu4g01301 1162 Gene3D Ribonuclease Inhibitor 375 506 IPR032675 -
Lapu4g01301 1162 ProSiteProfiles Protein kinase domain profile. 883 1157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g01301 1162 Gene3D Phosphorylase Kinase; domain 1 846 958 - -
Lapu4g01301 1162 Pfam Leucine Rich Repeat 219 241 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01301 Lapu-Chr4 29932358 29936594 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01301 62 1162 Receptor kinase-like Gene Family AT3G02130 63.345 0.0 1327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Lapu4g01301 Pkinase 8.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01301 - - vum:124828178 2001.48