Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01299 ATGGCACAACCACCACCAAAGCTGAAACTTCACCAACTTCTTCTCGTATCTCCACCCGAAGACACTCCTCCAATCTCTCTTCCCTTCACCTTCTTTGACGTTCTCTGGTTAAGGTTCCCCCCAGTTGAACGTCTTTTCTTCTACGAACTCCCCAACCCAACCATCTCATTCTTTAACACCATTCTTCCCAACCTCCAACACTCTCTCACCCTCACACTCCAACACTTTCCCACTCTCGCTGGCACCATCACATGGCCTCTTCACTCCCCCTTACCCCTCATAAGCTACATTCCTGGAAACTCAATCCCCTTCACAATCGCCGAATCCAACGCCAACTTCACCACCGTATCAGAATCCAACCACCGACACCACCTAATCCCCCACTTAACCATCTCACACGACCGAGCCTCAGTGTTAGCCCTCCAACTCACCCTTTTCCCCAACCAGGGCTTCTGCATCGGCATAACCTCACACCACGCAGCCCTCGACGGAAAATCCTCCACCTTGTTCATCAAATCATGGGCGCACCTCTGTTCCCACCTCAAGGACTCACATTCCCCACCACTCCAAAAACCCTTGTCATTACCCAAGCATCTAACACCTTCCTTTGACAGGTCCACCATAAGAGACCCTTCGGGGATCGGTGAAGTCCACGCCAACTCGTGGCTGAGCTTCGGAGGAGAGACCAGCAACAATCGAAGCCTGCTCGTGTGGGAGTCCCTCCCCCAAACGGAAACCGATTTGGTCAAAGGGGTGTTCGTGCTGACGGCAGACAACATAAAAAAGCTGAAGAATTTGGTGGAGTTAGCGGAGTCTAAGGTTGTCGAGAAGAAGAAGGCCAGGGTTACGTCGTTTACAGTCACGTGCGGTTATTTGCTGTCATGTGCTGTTAGAGTGGGAGAAGGGGAGGGTGAGAGGGTGGTGTTTGTGTTCACGGTGGATTGTAGGTCGCGTTTGGAGGATCCGGTGGAAGGAACGTACTTTGGAAACTGTGTTGTGCCACGTTTGGTTGAGCTTAAGAGAGAGGAGGTGTTGGGGAGTGAAGGATTTGTGAAGTGTGTGGAAGGGATAAGGGAGGAGTTGAAGGAGGTTGAGGGTGATGTGTTGAGAGGATTGAAGGAGTGGATTCCGTAG 1134 0.5168 MAQPPPKLKLHQLLLVSPPEDTPPISLPFTFFDVLWLRFPPVERLFFYELPNPTISFFNTILPNLQHSLTLTLQHFPTLAGTITWPLHSPLPLISYIPGNSIPFTIAESNANFTTVSESNHRHHLIPHLTISHDRASVLALQLTLFPNQGFCIGITSHHAALDGKSSTLFIKSWAHLCSHLKDSHSPPLQKPLSLPKHLTPSFDRSTIRDPSGIGEVHANSWLSFGGETSNNRSLLVWESLPQTETDLVKGVFVLTADNIKKLKNLVELAESKVVEKKKARVTSFTVTCGYLLSCAVRVGEGEGERVVFVFTVDCRSRLEDPVEGTYFGNCVVPRLVELKREEVLGSEGFVKCVEGIREELKEVEGDVLRGLKEWIP* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01299 377 Coils Coil 260 280 - -
Lapu4g01299 377 Gene3D - 11 233 IPR023213 -
Lapu4g01299 377 SUPERFAMILY CoA-dependent acyltransferases 64 194 - -
Lapu4g01299 377 SUPERFAMILY CoA-dependent acyltransferases 278 364 - -
Lapu4g01299 377 Gene3D - 244 377 IPR023213 -
Lapu4g01299 377 PANTHER - 9 376 - -
Lapu4g01299 377 Pfam Transferase family 15 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01299 Lapu-Chr4 29908093 29909673 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01299 7 332 Monolignol Biosynthesis Gene Families AT5G48930 24.036 8.71e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01299 - K13264 gmx:100127365 493.041