Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01298 ATGGAGAAAGAAACAAGTGTGAAAGTTCTCCAAGTTTGCACTGTGGAACCACCACCACATGGAGCAACCACCATTTTCTCCAACCCAACATCTTTGCCTCTCACATTCTTTGACCTACTATGGTTAAGGAGTCCCCCGGTTGAACGTCTTTTCTTCTATCAACTTCCCAACCCAACAATCTCATTCTTAGACACCATTGTTCCCAATCTCAAACACTCTCTATCTCTCACACTCCAACACTTTCTCCCTCTTGCTGGCACCATCACTTGGCCTGAAGACTCTCTCCACCCCATCATCAATTATGTCCCTGGCAATGCTGTTTCCTTCACCATAGCTGAGTCCACCACTGATTTCAACATGCTTTGTTCCAATGCCTGTGAGGCTTCTCAACGCCATCCCTTGATACCCCACTTGGTCACTTCCCATGAACAAGCATCTGTGATGGCCCTCCAAGTTACCCTTTTTCCTGGTTCTGGCTTTTGTATTGGAATATCCACACACCATGCAGCTATGGATGGGACAGCCTCAACTTTGTTTCTCAAAGCTTGGGCTCATGTTTGCTCCAATAACCTCACAGAATCATCGTTTTTGTCATTACCGAAACACCTCACGCCCTCGTATGATAGGTCAATGATAAAAGACACCACAGGAATGGGTGCAGCGTATGTGAAAAGTTGGTTGAACATTGGTGGACCAAATAATAGGAGCATGAAGGTGTGGGATCTTGGAGGTGTAAATGCAATGTCAGGCGAATCAGTTAGAGGGTCGTTTGAGTTAACCTCTTTAAACATCCAAGAACTGAAGCAACATGCAAAATCTAAGCTGAAAGAGAATGCTCATGTGTCAACATTTTCGGTTACATGTGCTTATGTGTTGCAGTGTTTGGTGAAGGCAGAACAACCGAAGACCAATGGAGTGGCCTTTATGTTCAGTGTGGACTGTAGATCTCGCTTGGAGGCACCTATTTCCTCCACATACTTTGGAAATTGCATTATTGGTCATAAGGTTATGGATGGAACAAAGAAGTTGTTAGGAGATGATGGTTTCATCAATGCTCTTGAAGGGGTGAATGAGGCTTTGAAGAAGTTGGAGGATGGAGTGTTGAGTGGAGCAGTAAGTTTGTCTACAATGATGCAAATTGCGAGGGATAATAGAATTTTTACAACTGCAGGGTCACCACGATTTGAGGTTTATAGTATTGATTTTGGATGGGGAAGGCCTAAGAAGGTGGATATGACATCTATAGGCAAAACTGGAGCATTTTGTCTCTCTGAAAGTAGGAATGGCAATGGAGGAGTCGAGATTAGTTTGGTGTTGAACAAACAAGTGATGGAAACTTTCACTGCTTATTTTACTCAAGGTCTTCAATCCCTTTAA 1377 0.4357 MEKETSVKVLQVCTVEPPPHGATTIFSNPTSLPLTFFDLLWLRSPPVERLFFYQLPNPTISFLDTIVPNLKHSLSLTLQHFLPLAGTITWPEDSLHPIINYVPGNAVSFTIAESTTDFNMLCSNACEASQRHPLIPHLVTSHEQASVMALQVTLFPGSGFCIGISTHHAAMDGTASTLFLKAWAHVCSNNLTESSFLSLPKHLTPSYDRSMIKDTTGMGAAYVKSWLNIGGPNNRSMKVWDLGGVNAMSGESVRGSFELTSLNIQELKQHAKSKLKENAHVSTFSVTCAYVLQCLVKAEQPKTNGVAFMFSVDCRSRLEAPISSTYFGNCIIGHKVMDGTKKLLGDDGFINALEGVNEALKKLEDGVLSGAVSLSTMMQIARDNRIFTTAGSPRFEVYSIDFGWGRPKKVDMTSIGKTGAFCLSESRNGNGGVEISLVLNKQVMETFTAYFTQGLQSL* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01298 458 Gene3D - 249 458 IPR023213 -
Lapu4g01298 458 Gene3D - 6 237 IPR023213 -
Lapu4g01298 458 PANTHER - 6 457 - -
Lapu4g01298 458 SUPERFAMILY CoA-dependent acyltransferases 278 457 - -
Lapu4g01298 458 Pfam Transferase family 30 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01298 Lapu-Chr4 29899456 29901022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01298 50 453 Monolignol Biosynthesis Gene Families AT5G48930 24.460 1.10e-17 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01298 - - vra:106767538 758.829