Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01296 ATGTCTAAAAAGGCTTTCACATCAATGAAGGATGAAAATCCAGATTTGCAGAAGCAAATTGGGTGCATCAGTGGGTTTTTTCAGCTCTTTGACCGCCACAGTTTCCTCACAGGCCAACACAGTAGCAGCCACAATCAGAACATACCAACTAAAGGTGGAACAAGGAACCAAATCAAAGAGGTGAATGATACAACTCAAAAGGCAACGGGAAATAATGTGAAGGTTGCAGGAGAGAATCAGCAATTCTCCACAGAATCATCAGGAACTTCAATGTCTTCATCCTCTCGTTCATCTAGCATGTCATCCCTCGAGTTCAATAGGACAATTCAGATAGAACCACCACCAATTAGTCCAATGAAAATTGCAGAGAACTCTAATTCAGAAGTAGCAATGAAGCAACATGGCAACCAAGGCCCTCAATCCCTTGATTTCCATGACATTGTGAAAGAGTCCATGCACAGAGATGTTCAAGGATTGTCTGTAAAAATTGTAGCTAAAGAGGAAAAGAAGGGTAGAGTCTTGAAATACGTTGACTCTCCCAGGCCTTTGGAGCCCCCAAAACCTGTCAATATGGTTGCTTGGGATTCACCGAGACTTTCTTATGACGGGAGGGACACACAAGATACATTAAAATCTGCCTCAAAGCCTAAGGAACTTCCCAGGCTTTCCTTGGACAGCAGAGAAGGATCCATCAAAAGCTTCAATGAAGGAACAAAATGTCGCAGCCTTCTGAAGGGTCTACAGAAAGGGCATGGTAGCTCTGGCACAATGCTGAAGCAGCTGCAGGAACCAGAAACTTCTAGAAGATCATCCAGTGTTGTAGCAAGGTTGATGGGACTAGAAGCATTCCCAGATTGCACAGAAACTTGTGATACTCAACCATGGATCTCTACCAGCAAGCATGAGCCAATTGCAGAACCTAGCACAAATGACGAGTACAAGCAACACCAGAGTGCAGCATCAATGAAGGAATCTACTTTGGTTCAGTTTAGGAGGGATGTTTCAATCCTAAATGTGACACCGTATTCACGGTTTTCCCTAGAACCAACTCCATGGAGGCAACCTGAAGCAAGCCAAGGTTCTCAACTACAGACTTCCAAGAGAAGTGAATCTTCAGCAAAAGCATCAAACCAATCGCTCTCTGTATATGGGGAAATTGAAAAGAGGATAGCAGATATAGAGTTCAAAAATTCTGGAAAGGATCTCAGAGCCCTTAAACAGATTCTTGATGCAATGCAGAGATATAAAGAATCATTCGATATTACAAGGGATCAGGCTTCAAATTCTCTATCTGACAACAGGAGTAATAGCAGTCTTAGTGAAAGCTCGATAGCTAAAAGCCCAAGAATACGGCAGAAGGACCCAACATCCACCACTGTTGAGATGTCAAATTCAACCCAGGGCAGTAAGTCACCAATTTTCATCATGAAACCAGCAAAAGCTGCAAGACAAACCAACAGTCCTGCTTCCACAGAAATGACATTTCAGGGTAAATCAAGCCCCAGCAATTTTAGTCCTGCTAATCCTGCAAATGGAATAGTGGGTGACAAGCTTGACAGGAAAACAACAAAGGGTATCAGTCCAGCAATCAGACATGCCAAGGATTCCATTGGTCAACCCTTCCACTCGGTGGATAAGAGTAACAATAAGATGAGAACATCAAAATTGTTGCAATCCCCAAGAGTTCCTCAAGCAATCACTGGGGAAAATGCCACCAACTCAAGCAATACAACAGATGCCAAGAGCCCAAGACTACAAAAGAAGTTTGGTTTCGAGAGGCGCTCTCCAACAACTAGCCCATCATCAAATTCAAGCAGTAACAGAAGACAACACAATAGGCAATCAGTGGAATTGTCTTCCCCAAGTACTACTACACCCAGACAAAAATCCAATGAGATCAAAAACCAAAGGGGGGATTTTAAGCACGAAGTTGATGTAGAAGTCATTCACATTGATCATTCTGATATGATCAACAGTAACTCCATCCAGTTGAAGGGCATGAATCAAAATAATGAAGCAAAAGAGTTGAGCAAGGAAAGCTTTATGGCTGAGAAAATAATTACAGTAGAACAACCAAGCCCTGTGTCTGTTCTTGATGCTGCTTTCTACAGTGAAGAACCACCTTCTCCAGTTAAAAAGAAATCAGATATCTCAAAAGATTTAGATGATGCTCTTAACACTTATGATAGTAGTGAGGAGAACTCAGAAGATCTTCCGCTCAATGCAATTGCCAACTTCAGCAGTAGAATCAGTGATACTGACTCGAGAAATCAAAATTTGGTTCAAATTCTCCATCAAATTGACTCCAATGATGAGAGATTTACCAATTTCAGAGACTATATAGATCCTGACCATAAATATATATCAGAAATACTGTTAGCATCAGGGATGCTCAGCAGTCCAACCTCTAGCTACGGTTTTCATTCATCAATTCACCCAATAAACCCAAAGTTGTTCCTTGCACTGGAGCAAATCAAGACAAACAAGAAGTGTTTCAACATTGAATACAATGCCAAGAAAATTGCTGGGCTGAATAGTCCTGAGAAAATGCAAAGAAAGCTAATATTTGATGTCGTTAATGACATTCTAGCTCAGAAAATAATATCGGAAAGTTCTACTTCGTGGAGCCAGTCAAATCAGCCAATAAGTAGAAAAATAAGTGGACAGCTGCTTTTGGATGAGCTTTGCACAGAAATTGACAAGTTACAACATAAAAATAGGAATGTCAACCTGGCTAATGAGGATGAGAACATGACAAGTCTCCTGTGGGAAGAGTTGATGCACTGTCCCACAATTTACACAAACAGTTACCTGGAAATTCCAAATGTTGTGCTGGATATTGAACGGTTGATCTTCAAAGATTTGATAACTGAAGTTGTGAGAAGTGAACTAGCTAACCATTCTGGTAAGCATTGCAGACAACTGCGGTTTTCCAAGTAG 2940 0.4129 MSKKAFTSMKDENPDLQKQIGCISGFFQLFDRHSFLTGQHSSSHNQNIPTKGGTRNQIKEVNDTTQKATGNNVKVAGENQQFSTESSGTSMSSSSRSSSMSSLEFNRTIQIEPPPISPMKIAENSNSEVAMKQHGNQGPQSLDFHDIVKESMHRDVQGLSVKIVAKEEKKGRVLKYVDSPRPLEPPKPVNMVAWDSPRLSYDGRDTQDTLKSASKPKELPRLSLDSREGSIKSFNEGTKCRSLLKGLQKGHGSSGTMLKQLQEPETSRRSSSVVARLMGLEAFPDCTETCDTQPWISTSKHEPIAEPSTNDEYKQHQSAASMKESTLVQFRRDVSILNVTPYSRFSLEPTPWRQPEASQGSQLQTSKRSESSAKASNQSLSVYGEIEKRIADIEFKNSGKDLRALKQILDAMQRYKESFDITRDQASNSLSDNRSNSSLSESSIAKSPRIRQKDPTSTTVEMSNSTQGSKSPIFIMKPAKAARQTNSPASTEMTFQGKSSPSNFSPANPANGIVGDKLDRKTTKGISPAIRHAKDSIGQPFHSVDKSNNKMRTSKLLQSPRVPQAITGENATNSSNTTDAKSPRLQKKFGFERRSPTTSPSSNSSSNRRQHNRQSVELSSPSTTTPRQKSNEIKNQRGDFKHEVDVEVIHIDHSDMINSNSIQLKGMNQNNEAKELSKESFMAEKIITVEQPSPVSVLDAAFYSEEPPSPVKKKSDISKDLDDALNTYDSSEENSEDLPLNAIANFSSRISDTDSRNQNLVQILHQIDSNDERFTNFRDYIDPDHKYISEILLASGMLSSPTSSYGFHSSIHPINPKLFLALEQIKTNKKCFNIEYNAKKIAGLNSPEKMQRKLIFDVVNDILAQKIISESSTSWSQSNQPISRKISGQLLLDELCTEIDKLQHKNRNVNLANEDENMTSLLWEELMHCPTIYTNSYLEIPNVVLDIERLIFKDLITEVVRSELANHSGKHCRQLRFSK* 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01296 979 MobiDBLite consensus disorder prediction 425 472 - -
Lapu4g01296 979 MobiDBLite consensus disorder prediction 247 269 - -
Lapu4g01296 979 MobiDBLite consensus disorder prediction 592 631 - -
Lapu4g01296 979 MobiDBLite consensus disorder prediction 253 269 - -
Lapu4g01296 979 Pfam Domain of unknown function (DUF4378) 784 958 IPR025486 -
Lapu4g01296 979 MobiDBLite consensus disorder prediction 38 57 - -
Lapu4g01296 979 MobiDBLite consensus disorder prediction 425 639 - -
Lapu4g01296 979 PANTHER LONGIFOLIA PROTEIN 1 975 IPR033334 GO:0051513
Lapu4g01296 979 MobiDBLite consensus disorder prediction 483 509 - -
Lapu4g01296 979 MobiDBLite consensus disorder prediction 541 583 - -
Lapu4g01296 979 MobiDBLite consensus disorder prediction 299 324 - -
Lapu4g01296 979 Coils Coil 892 912 - -
Lapu4g01296 979 MobiDBLite consensus disorder prediction 197 221 - -
Lapu4g01296 979 MobiDBLite consensus disorder prediction 347 379 - -
Lapu4g01296 979 MobiDBLite consensus disorder prediction 63 104 - -
Lapu4g01296 979 MobiDBLite consensus disorder prediction 201 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01296 Lapu-Chr4 29867110 29872612 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01296 142 974 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 31.102 2.25e-82 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01296 - - gmx:100793602 1494.18