Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01287 ATGAGGTTTAACACTATCATCTTTCTCCTTCTCCACCTCTTCACGCACCACCAAGCCTACACCCCAGTGAACAATTTCACCATCAGTTGTGGCACCACTGGAACATCCTACGACGGTGAAAGGACGTGGACCGGAGATGCAGATTTAGGGCTTTTACTAAATCAAGACAACAACGTTTCTGCTGAAGCTGCAACGCAATCTCCTTCTACCAACCATGTCCCCTACGCCACAGCTCGCCTTTCTCGTTCCCAATTCGGTTACTCCTTCTCTGTCACCGCAGTTGGTGTGTTTTTCATATCACTTGTTTTATGTGTGAAGACTTCCAAGTGGACACTCTGGTTCCCAACGACCAAGATAACCCGAACGCAGAATTGTTCTCTGTCGTCCCATGTCTGCCGCCGGTTCTCCATCACGGAGATCAAAGCCGCCACTAAAAACTTTGACAACGTCTTAATCATCGGCGTAGGTGGATTCGGTCACGTGTACAAGGGTTACATCGACGGAGGTTCCATCCCCGCCGCCATCAAGCGCCTGAGACAGGGTTCACAGCAAGGGGCTTGTGAGTTCATGAACGAGATAGAGATGCTCTCACAGCTCCGCCACCGCCATCTGCAACGCCTGAAGATTTGCATTGGCGCCGTGCGCGGGCTTCGCTATCTTCACAGTGGCGCGAGGCACATGATCATCCACCGTGACGTGAAAACGACGAACATCTTGTTGGATGAGAAGTGGGTGGCGAAGGTTTCGGACTTCGGGCTATCCAGAATAGGGCCGAGTGGCATGTCGAAGTCCCATGTGAGCACCGCCGTGAAAGGCAGCTTTGGGTATTTAGACCCAGAGTATTGTATCCGGCACCGGCTGACGGAGAAGTCTGACGTGTATTCTTTGGGGGTGTTGTTGTTTGAGGTACTCTGTGCCCGTTCTCCTGTTATCCATACAGAAGAAACCGAACAGGTGTCACTTGCTAATTGGGTCAGATATTGCTACCAAAATGGGACAATGGCGGAGATTGTGGATCCAGTTTTGAAGGGGAAGATCGCCCCCGAGTGTTTCGCCAAGTTTTGTGAGATTGGGATGAGTTGTTTGTCACAAGAGGGAATGCAGAGACCGTCCATGAACGACGTGGTTTTGATGCTGGAGTTTGCCTTGAAACTGCAAGAGAGTGCTGACGAATGCGAAAAGGGAGTTCATGAAAACACAGAGGAAGATATTGAGGATGTGTTTGATACCGAAGAGCACCACAACAGTTACAAGGACAATGATAAGGTGATTTTTGAACTGTTTTCTGAGATTGTCGACCCCAAGCCACGTTGA 1314 0.5 MRFNTIIFLLLHLFTHHQAYTPVNNFTISCGTTGTSYDGERTWTGDADLGLLLNQDNNVSAEAATQSPSTNHVPYATARLSRSQFGYSFSVTAVGVFFISLVLCVKTSKWTLWFPTTKITRTQNCSLSSHVCRRFSITEIKAATKNFDNVLIIGVGGFGHVYKGYIDGGSIPAAIKRLRQGSQQGACEFMNEIEMLSQLRHRHLQRLKICIGAVRGLRYLHSGARHMIIHRDVKTTNILLDEKWVAKVSDFGLSRIGPSGMSKSHVSTAVKGSFGYLDPEYCIRHRLTEKSDVYSLGVLLFEVLCARSPVIHTEETEQVSLANWVRYCYQNGTMAEIVDPVLKGKIAPECFAKFCEIGMSCLSQEGMQRPSMNDVVLMLEFALKLQESADECEKGVHENTEEDIEDVFDTEEHHNSYKDNDKVIFELFSEIVDPKPR* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01287 437 FunFam Receptor-like protein kinase FERONIA 190 402 - -
Lapu4g01287 437 Pfam Protein tyrosine and serine/threonine kinase 153 207 IPR001245 GO:0004672|GO:0006468
Lapu4g01287 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Lapu4g01287 437 Gene3D - 25 148 - -
Lapu4g01287 437 ProSitePatterns Protein kinases ATP-binding region signature. 153 176 IPR017441 GO:0005524
Lapu4g01287 437 SMART serkin_6 147 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g01287 437 Gene3D Transferase(Phosphotransferase) domain 1 194 418 - -
Lapu4g01287 437 PANTHER OS07G0166700 PROTEIN 132 204 IPR045272 GO:0004714|GO:0006468
Lapu4g01287 437 Pfam Protein kinase domain 209 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g01287 437 SUPERFAMILY Protein kinase-like (PK-like) 122 382 IPR011009 -
Lapu4g01287 437 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Lapu4g01287 437 FunFam receptor-like protein kinase FERONIA 114 213 - -
Lapu4g01287 437 ProSiteProfiles Protein kinase domain profile. 74 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01287 Lapu-Chr4 29770252 29772718 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01287 117 403 Receptor kinase-like Gene Family AT3G51550 56.881 2.18e-118 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lapu4g01287 Pkinase 2.9e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01287 - - vra:106770147 478.404