Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01285 ATGGCTCCTTTACCCTGTCTACCATGTTTCACCACCACAAAATCCAAAACCAAAAGCAACTTTATCCCAATAGAACAACTCTGCCACCGCTTCTCTCTTGCTGAGCTTCAGGCAGCCACAAATAAGTTCAATCCGAGTTTCATAGTCAATGGAGAAGGTCAATGTCAGGTCTACAAAGCCCACCTTAAAGCCCATGGAGACGTAGCCATCAAGCACTTCAAGACTAGAAGCCCAGCTCATGATATAGAATTCAGAGCCGAAGTCAAGATTCTGTGCCAACTACACCACCCAAATATTGTTCCTTTGGTTGGTTTCTGCGAGCACAAAAAGGACAAGTTTGTTGTGTATGATTATGTCTTCAATGGAATCCTCTACGATTGCTTGCATGGCACCAACAATAACAGCGTTGTTCCCTTGTCATGGACACAAAGACTTAACATCTGCATTGGGGTTGCTCGTGGACTGCACTACATTTACTTTGAAACAAAGATACCTATCATGCACCGTGCTGTGAAATCAAGCAACGTTCTTTTGGACCATAATTTGGTGCCTAAAGTGGCAGATTTTGGACTTGGCAAGAAGCACCCTCAAGAGGAGTCAAGGCCAAAACCACCAAGAGTTGAGTTGAGGGAGAACTTGGAGGCTAGTTTGGAATACATGGAGCCGGAGTATTTTATGACTGGATGGTTATCAGACAAATCTGATGTGTACTCTTTTGGGGTGGTAATGTTAGAGATTTTGTGTAGGAAGGAAGCATGTTTTTTAACCCCAGGTGGAGATTGTGAGTACCTTGTTAAGTGGGCCTTTGATGATGAAAGGAAAGGGGTTCTTGAGAAGATTGTTGATCCAGCTCTTATTGGAAAAATAGCACCAGCTTGTTGGGAACCGTTCATTGAGATTGTTCAGAGATGCTTGGCTTCAGTTGAAGAGAGGCCAACGATGGGTGAAATGGTGGTGGTTCTTGAAAATGCATTTCTGTTGCAAGAGAGAGCAGATGGTGTGAAGAAGTGTGAT 1014 0.4369 MAPLPCLPCFTTTKSKTKSNFIPIEQLCHRFSLAELQAATNKFNPSFIVNGEGQCQVYKAHLKAHGDVAIKHFKTRSPAHDIEFRAEVKILCQLHHPNIVPLVGFCEHKKDKFVVYDYVFNGILYDCLHGTNNNSVVPLSWTQRLNICIGVARGLHYIYFETKIPIMHRAVKSSNVLLDHNLVPKVADFGLGKKHPQEESRPKPPRVELRENLEASLEYMEPEYFMTGWLSDKSDVYSFGVVMLEILCRKEACFLTPGGDCEYLVKWAFDDERKGVLEKIVDPALIGKIAPACWEPFIEIVQRCLASVEERPTMGEMVVVLENAFLLQERADGVKKCD 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01285 338 SUPERFAMILY Protein kinase-like (PK-like) 17 318 IPR011009 -
Lapu4g01285 338 Pfam Protein tyrosine and serine/threonine kinase 55 319 IPR001245 GO:0004672|GO:0006468
Lapu4g01285 338 Gene3D Phosphorylase Kinase; domain 1 9 118 - -
Lapu4g01285 338 PANTHER OS07G0166700 PROTEIN 27 328 IPR045272 GO:0004714|GO:0006468
Lapu4g01285 338 ProSiteProfiles Protein kinase domain profile. 43 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g01285 338 Gene3D Transferase(Phosphotransferase) domain 1 120 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01285 Lapu-Chr4 29760587 29761600 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01285 7 331 Receptor kinase-like Gene Family AT5G61350 39.577 6.12e-72 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lapu4g01285 PK_Tyr_Ser-Thr 1.5e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01285 - - var:108344519 603.979