Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01283 ATGGGCGAGACGAAGGCCCATGTCTCCACCACCGCCATGAAGGGTAGCTTTGGCTACATAGACCCGGAGTATTATAAACGGCAGCATTTGACGGAAAAGTCTGACGTGTACTCTTTCGGAGTAGTGCTGTTTGAGGTGCTATGCGCTCGTGCGCCTCTTATCCACACCACGGATCCCAGACAAGAGTCTCTTGGTAATTGGGTTAGGTGCTGTTACCAAAATGGAACCATGGAACAGATATTGGACCCTACGTTGAAGGAGAAGATCGCGCCCGAATGCTTTGAAATTTTTTGCAAGATTGGGGTGTGTTGTTTGTCAGAAGTTGGGACGCAGAGACCGTCCATGAACGACGTCGTTGGGAACCTGAAGTATGCGCTGCAGCTACAAGAAAGGGCAGAAATTAACCCAATGTCTAGTTAA 420 0.4905 MGETKAHVSTTAMKGSFGYIDPEYYKRQHLTEKSDVYSFGVVLFEVLCARAPLIHTTDPRQESLGNWVRCCYQNGTMEQILDPTLKEKIAPECFEIFCKIGVCCLSEVGTQRPSMNDVVGNLKYALQLQERAEINPMSS* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01283 139 Gene3D Transferase(Phosphotransferase) domain 1 1 137 - -
Lapu4g01283 139 SUPERFAMILY Protein kinase-like (PK-like) 8 120 IPR011009 -
Lapu4g01283 139 Pfam Protein tyrosine and serine/threonine kinase 6 121 IPR001245 GO:0004672|GO:0006468
Lapu4g01283 139 ProSiteProfiles Protein kinase domain profile. 1 125 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g01283 139 PANTHER OS07G0166700 PROTEIN 5 129 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01283 Lapu-Chr4 29754658 29755212 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01283 7 135 Receptor kinase-like Gene Family AT3G51550 59.690 6.51e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lapu4g01283 PK_Tyr_Ser-Thr 2.6e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01283 - - vun:114181146 230.335