Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01281 ATGGCGAGATCCAAGTTAAGTTCATGCTTGTTCTCAACCAACGCACACGAACTGTCGACAATCCAGCCCGAACTGTCGACAATCCAGCCCGAACCGTCATCCAACACTATCATCTGCCGGCGACTCTCCCTCGTCGAGATCAAAGCCGCCACCAACAACTTCGACCGCGCTTCCCTCGTCGGCGCGGGGGGATTCGGCCACGTGTACAGGGGCTTAATCAGAAGAATTTTCATCCCGGTGGCTCTCCGGCACTTGAAACCGGGTTCAAAAGGTGCTCAAAAGTTCCTTAACGAGATCGAGGTGGCTATCAAGCGCCTCAAACCGGATTCAAAGCAGGGCGCTGAAGAGTTTATGAACGAGATCCAGATGCTCTCGCAGCTCCGCCATCGCAATCTCGTTCCACTCATCGGTTACTGCAACAACAAAAAGGAGATGATCCTGGTCTATAATTTCATGGCACGCGGCAACCTCCGCGACCATCTCTACAACAGCAACAAACCTCCTTTGCCATGGAAGCAACGCTTGCAGATTTGTATCGACGTGGCGCACGCGCTGCATTATCTTCACAGCTGCGCCAATACATATCCGATCATTCACAGCGACGTGAAAACGACGAATATTTTGTTGGATGAGGAGTGGGTGGCGAAGGTTTCGGACTTTGGGGTTTCCAGAATTGGGCCCATGGACGAGTCCAAGGCCGATGTCTGCACCACCGCCGTGAAGGGTAGCTTTGGATATATAGACCCGGAGTATTATAAACGACAACACTTGACGGAAAAGTCTGACGTGTACTCCTTCGGAGTGGTGCTGTTTGAGATATTGGATCCCACGTTGAAGGGGAAGATCGCGCCAGAATGCTTTAGAATGTTTTGCCAGATTGGGGTGAGTTGTTTGTCAGAAGTTGGGACGCAGAGACCGTCCATGAACGACGTCGTTTGGAAGCTTAAGTACGCGTTGCAGCTTCAAGAAAGGGCAGAAATTAAGCCAATTGAATAA 996 0.511 MARSKLSSCLFSTNAHELSTIQPELSTIQPEPSSNTIICRRLSLVEIKAATNNFDRASLVGAGGFGHVYRGLIRRIFIPVALRHLKPGSKGAQKFLNEIEVAIKRLKPDSKQGAEEFMNEIQMLSQLRHRNLVPLIGYCNNKKEMILVYNFMARGNLRDHLYNSNKPPLPWKQRLQICIDVAHALHYLHSCANTYPIIHSDVKTTNILLDEEWVAKVSDFGVSRIGPMDESKADVCTTAVKGSFGYIDPEYYKRQHLTEKSDVYSFGVVLFEILDPTLKGKIAPECFRMFCQIGVSCLSEVGTQRPSMNDVVWKLKYALQLQERAEIKPIE* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01281 331 ProSiteProfiles Protein kinase domain profile. 54 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g01281 331 Gene3D Transferase(Phosphotransferase) domain 1 152 328 - -
Lapu4g01281 331 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Lapu4g01281 331 PANTHER OS07G0166700 PROTEIN 272 322 IPR045272 GO:0004714|GO:0006468
Lapu4g01281 331 Pfam Protein tyrosine and serine/threonine kinase 59 275 IPR001245 GO:0004672|GO:0006468
Lapu4g01281 331 SUPERFAMILY Protein kinase-like (PK-like) 33 321 IPR011009 -
Lapu4g01281 331 SMART serkin_6 54 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g01281 331 Gene3D Phosphorylase Kinase; domain 1 20 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01281 Lapu-Chr4 29740186 29741283 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01281 38 326 Receptor kinase-like Gene Family AT3G51550 52.469 6.43e-106 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lapu4g01281 PK_Tyr_Ser-Thr 5.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01281 - - vun:114180426 502.286