Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01280 ATGACCTTCCTCACTTTTACCACCTCCTTAACACTCTTCTTCTTTCTTTCACACTTCTCCACACACCTCCATGCCTACATCCCGGAGGAAATTTTCACTATCAGTTGCGGCACCACCGGGATTTCCTCCGACGGTCAAAGAACGTGGACCGCCGACGGTGACACGAAGTACTTATCTTCCCAAGACGCCACCGTTTCAGACAGGGCAACAACCCAGTCTCCTTCCACCAACCAAATCCCCTTCTCCACCGCACGCCTGTCCCGTTCTCATTTCAATTACTCATTCCCCGTCTCCCCAGGCCCCAAATTCGTTCGCCTCTTCTTCTACCCTGCTGACTACCCTTCCTTTCCCCGCACCGACGCATCTTTCACCGTTCTATCCAACCAATTCACTCTCCTCAATGCTTTCAACGCCTCTCTTAACGCCGACGCTCAAGGCACGGACACTATCTTCAGAGAATACGTGGTAAACGTCAACGACGGAGAGAGGCTTATCCTCACCTTCACTCCCCAACAAAACTCCTACGCTTTCATAAATGGAATCGAGGTGCTTTCCATGCCAACCGATTTATATTACACGCCAACAAATGAGCCAGGCTTCACGAACATAGGAAGCAGCACGCTGTACAGCGTTGGAGCCAGTTTTGCACTTGAAACAGAGTATAGAATCAAAGCGGGAGGACAAGAAATCCCGCCACAAAACGACACCGGTTTACTTAGGAGTTGGGCTGATGAAGAACAATATTTTATTAAACATAATCCAAAGAATGATGATCTACCAGCTGACACTAGTGGGAAGAGGAACATAACCGTGAATCCTGACTACATAGCACCCAAGGAACTGTTCAGAACAGCGCGTAGCATGGGCACAAACGCCACACTCAACAAAATGAGCAACCTCACTTGGGAGTTCCCCGTTGATTATGGCTTCACTTACGTTCTCAGGCTACACTTTTGCGAGCTTGATCCCAATATTCATGACATCGGTGATAGGCAATTCATCATTTACATAGCGAACGGGTTGGCTGAAGATCGTGCAGATGTAATGAAATGGAGTCAGAAACAAAAAGGTCTAGCAGTGCACAGAAACTATGCCGTTTTGATTCCCAACAATGGTACTAACAAAAAGTTTAATCTCTCGCTTCAAATGCACACTTACGGAAGTAATAGGGATACCAGTTACAGCGACGCTTTCCTGAACGGCCTCGAGATCTTCAAAATCAGCGAGGCCGGCTCAAACAACCTCGCCGGACCCAACCCGGACCCGGTTCAGACTAACAGCATACCGGGCCAAAACGGAAAGAGAAGCGGCGGAAGTGGAACAGCAAGAATCGGCGTCGTAGCGGGGGTGGTGTCCGGGGTCGTTTTGATCTCGCTAATCGTTTTGCTTGTCGTGTTTTTCCGACGCAAGAGAACCACAAACCCAAAAGATTACAACAAGTCAAAGTCTTCCGTGACTTCCAAGTGGGGTCCACTCTCCTTCACAACGACCAAGTCAACCACCACAAACTCCTCCCTACCGTCCGATCTCTGCCGCCACTTCTCCCTAGCGGAGATCAAAGCCGCAACCAACAACTTCGACGACGTCTTCATCGTCGGCGTCGGGGGATTCGGTCACGTGTACAAGGGCAACATCGACGGGGGCTCAACCCCGGTCGCCATCAAGCGCCTCAAAGCGGGTTCGCAGCAGGGTGCCCACGAGTTCATGAACGAGATCGAGATGCTCTCAAAGCTCCGCCACCTCCATCTCGTGTCCCTAATCGGATACTGCAACGAGATGAACGAGATGATCCTGGTCTACAACTTCATGGCGCGTGGCACCCTACGTGAACATCTCTACAACACGGATAACCCACCTCTCTCGTGGAAGCAGCGCTTGCAGATCTCCATCGGCGCGGCGCGTGGACTGCATTATCTCCACACAGGCTCGAAGCACACGATCATCCACCGGGACGTCAAAAGCACGAACATCTTGTTGGATGATAAGTGGGTGGCCAAGGTTTCGGACTTCGGGCTTTCCCGAATCGGGCCAACAGGCACAGACAAGTCCCACGTGAGTACCTTTGTGAAGGGAAGCTTTGGGTATATAGATCCCGAGTATTACAAACGTTATCGCTTAACGGAAAAGTCCGACGTGTACTCTTTCGGAGTAGTTTTGTTTGAGATACTATGTGGTCGACCACCCTTGTTACGCACCGCGAAGGCGCAAGAGGTGTCACTTTCTAATTGGGTGAGACATTGTTACAGAAGTGGGAGCATTGCAGATATTGTGGACCCCACGTTGAAGAAGAAGATTGCTGCAGAGTGCTTGAAGAAGTTTTGTGAGATTGGAGCGAGTTGTTTGTTGGAAGATGGGACGAAGAGGCCGTCAATGAAGGATGTGGTGGGGATGCTGGAATTTACGCTACAGCTACAAGAAAGTGCAGAGCAACGCGCAGTTGAAAATGACGAGGAAATTAGTGAGGACAGCTTCACTCCTACTGAATCGACTGTCACTACAACTTCGACCACTGACTCTACGGTGTTGTCTTTCACTCCTTTCTCGGAAATTGTGGATCCAAAGCCGCGTTGA 2571 0.5018 MTFLTFTTSLTLFFFLSHFSTHLHAYIPEEIFTISCGTTGISSDGQRTWTADGDTKYLSSQDATVSDRATTQSPSTNQIPFSTARLSRSHFNYSFPVSPGPKFVRLFFYPADYPSFPRTDASFTVLSNQFTLLNAFNASLNADAQGTDTIFREYVVNVNDGERLILTFTPQQNSYAFINGIEVLSMPTDLYYTPTNEPGFTNIGSSTLYSVGASFALETEYRIKAGGQEIPPQNDTGLLRSWADEEQYFIKHNPKNDDLPADTSGKRNITVNPDYIAPKELFRTARSMGTNATLNKMSNLTWEFPVDYGFTYVLRLHFCELDPNIHDIGDRQFIIYIANGLAEDRADVMKWSQKQKGLAVHRNYAVLIPNNGTNKKFNLSLQMHTYGSNRDTSYSDAFLNGLEIFKISEAGSNNLAGPNPDPVQTNSIPGQNGKRSGGSGTARIGVVAGVVSGVVLISLIVLLVVFFRRKRTTNPKDYNKSKSSVTSKWGPLSFTTTKSTTTNSSLPSDLCRHFSLAEIKAATNNFDDVFIVGVGGFGHVYKGNIDGGSTPVAIKRLKAGSQQGAHEFMNEIEMLSKLRHLHLVSLIGYCNEMNEMILVYNFMARGTLREHLYNTDNPPLSWKQRLQISIGAARGLHYLHTGSKHTIIHRDVKSTNILLDDKWVAKVSDFGLSRIGPTGTDKSHVSTFVKGSFGYIDPEYYKRYRLTEKSDVYSFGVVLFEILCGRPPLLRTAKAQEVSLSNWVRHCYRSGSIADIVDPTLKKKIAAECLKKFCEIGASCLLEDGTKRPSMKDVVGMLEFTLQLQESAEQRAVENDEEISEDSFTPTESTVTTTSTTDSTVLSFTPFSEIVDPKPR* 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01280 856 FunFam FERONIA receptor-like kinase 31 187 - -
Lapu4g01280 856 CDD STKc_IRAK 532 799 - -
Lapu4g01280 856 Gene3D - 29 187 - -
Lapu4g01280 856 Gene3D - 215 408 - -
Lapu4g01280 856 PANTHER OS03G0124300 PROTEIN-RELATED 6 480 IPR046957 GO:0004672
Lapu4g01280 856 Pfam Malectin-like domain 34 407 IPR024788 -
Lapu4g01280 856 FunFam Receptor-like protein kinase FERONIA 603 820 - -
Lapu4g01280 856 ProSiteProfiles Protein kinase domain profile. 526 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g01280 856 SMART serkin_6 526 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g01280 856 MobiDBLite consensus disorder prediction 415 439 - -
Lapu4g01280 856 MobiDBLite consensus disorder prediction 811 837 - -
Lapu4g01280 856 FunFam Receptor-like protein kinase FERONIA 498 602 - -
Lapu4g01280 856 FunFam FERONIA receptor-like kinase 215 408 - -
Lapu4g01280 856 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Lapu4g01280 856 MobiDBLite consensus disorder prediction 415 438 - -
Lapu4g01280 856 ProSitePatterns Protein kinases ATP-binding region signature. 532 555 IPR017441 GO:0005524
Lapu4g01280 856 SUPERFAMILY Protein kinase-like (PK-like) 501 801 IPR011009 -
Lapu4g01280 856 Pfam Protein tyrosine and serine/threonine kinase 532 797 IPR001245 GO:0004672|GO:0006468
Lapu4g01280 856 Gene3D Phosphorylase Kinase; domain 1 490 602 - -
Lapu4g01280 856 Gene3D Transferase(Phosphotransferase) domain 1 603 826 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01280 Lapu-Chr4 29730930 29733590 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01280 26 821 Receptor kinase-like Gene Family AT3G51550 50.122 0.0 733
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lapu4g01280 Malectin_like 4.2e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01280 - - gmx:100799780 1221.84