Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01275 ATGACTCAACCAGCGTCACCAGCAGCACCTTTCAAAGTTATCCAAGTTTGTTCAGTGGCACCACTTCATGAACCAACCCTTTCCACCGTTGTTCCAACCTCTCTTCCACTGACCTTCTTTGACATCTTATGGCTTCGATTTCCACCTGTTCAACGTCTCTTCTTCTATCCCTTCCCTCACCCAACCTCTTCATTCCTTCACTCTCTTCTTCCCTCTCTCAAACACTCTCTTTCCCTCACTCTCCACCACTTTCTCCCTTTCGCTGGCACCCTCACATGGCCCTCTAACTCTCCCAAACCCGTCATCAACTTTCTCCCCGGTGACTCTGTTTCCTTCACTGTCGCTGAGTCCAACCAAAACTTCAACCATCTTTGCTCCCATCTCTGTGAAGCATCAAAACGCGACGATTTAGCACCCCACTTGGCCCTTTCCCATGATCAAGCATCTCTGTTGGCAGTTCAAGTCACTGTGTTCCCAGACGCTGGCTTTTGCATTGGAATAACCACACACCATGCAGCTTTCGACGGAAAATCTTCAATCATGTTCATCAAATCATGGGCTTATATATGCTCTAACCTTCAAAACCCTACTACGCCTACACCAACTCCAACCTTACCTCAGCATCTTACACCTTTCTTTGACAGATCATTGATAAGAGATCCTTCTGGAATAGCTGAAGTGTACGCAGACACCTGGATGAATCACAATGGTTCGAATAACCGAAGTCTCAAGGCGTGGGAGTCTCTTACTGCAACACCGAGCGATGGACTCAAAGGGTTGTTTGAATTGACGCCTTCACAGATTCTAAAGCTCAAACAACACGCAAGCTCTAAGGTGAAAGTGAATGTTCATCTGTCAACGTTTTCTGTTACGTGTGCTTATGTGTTGGCGTGTTTGGTCAAAGTGAAACAAGTGAAGGAAGATAATGTGTTTTTCGTATTTAGTGTTGACTGTAGATCGCGCTTGGACCCTCCAATTCCCGCCACGTATTTTGGAAACTGCGTTGCAGGACGATTCGTTGGAGCTGTGACTAAGGAGTTGGTGGGAAAAGATGGGTTCATTTGTGCTTTGGAGGTGATAGTTGAGGCTTTGAATAGAGTGAAGGATGAGGGAGTGTTGAATGGAGCAGAAAGATGGGTTTCGAATATGCACGAACCGATGGAGGGTAGAATATTTTCTACTGGTGGATCCCCATGGTTTGAGGTTTATAGCATTGATTTTGGGTGGGGAAGGCCAAAGAAGGTGGATATGATTTCCACAGACAAAACAGGAGCATTTTCTCTTAGTGAAAGTAGGGATATCAGTGGAGGAATTGAGATTGGATTGATGTTAAGTAAACCTGAGATGGAAGATTTTTCTACCCTTTTTGTTCAAGGACTTGAATCCCTTTAA 1392 0.4519 MTQPASPAAPFKVIQVCSVAPLHEPTLSTVVPTSLPLTFFDILWLRFPPVQRLFFYPFPHPTSSFLHSLLPSLKHSLSLTLHHFLPFAGTLTWPSNSPKPVINFLPGDSVSFTVAESNQNFNHLCSHLCEASKRDDLAPHLALSHDQASLLAVQVTVFPDAGFCIGITTHHAAFDGKSSIMFIKSWAYICSNLQNPTTPTPTPTLPQHLTPFFDRSLIRDPSGIAEVYADTWMNHNGSNNRSLKAWESLTATPSDGLKGLFELTPSQILKLKQHASSKVKVNVHLSTFSVTCAYVLACLVKVKQVKEDNVFFVFSVDCRSRLDPPIPATYFGNCVAGRFVGAVTKELVGKDGFICALEVIVEALNRVKDEGVLNGAERWVSNMHEPMEGRIFSTGGSPWFEVYSIDFGWGRPKKVDMISTDKTGAFSLSESRDISGGIEIGLMLSKPEMEDFSTLFVQGLESL* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01275 463 Pfam Transferase family 34 453 - -
Lapu4g01275 463 Gene3D - 11 244 IPR023213 -
Lapu4g01275 463 PANTHER - 12 462 - -
Lapu4g01275 463 SUPERFAMILY CoA-dependent acyltransferases 283 446 - -
Lapu4g01275 463 Gene3D - 252 463 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01275 Lapu-Chr4 29706173 29707564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01275 73 412 Monolignol Biosynthesis Gene Families AT5G48930 27.195 2.17e-16 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01275 - - gmx:100800849 637.876