Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01272 ATGGTTATGTTGCATGTTCAGATCAGTTGCATCTCATGTTATATTTCAGCTGTTGTTACAATGAACAACTTCCAAAAATATCGTCATATCTCGGCACCTGGGTGGTCACTAGGATGGACATGGGCAAAGAAGGAGGTAATATGGAGCATGGTGGGAGCTCAGGCCACTGAACAAGGGGATTGCTCAAGATTTAAGGGAAACATCCCACATTGCTGTAAGAAGAACCCAATAGTTGTAGATTTACTTCCGGGAACACCTTACAATCAACAGATTGCAAACTGCTGCAAAGGTGGTGTACTCAGCTCTTGGGCACAGGATCAATCCAAAGCAGTTTCAGCCTTTCAAATCAGTGTAGGCAGTGCTGGTACCACTAACAAAACTGTCAAACTTCCACAAAGTTTCACCTTGAAAGCACCAGGACCCGGTTACACTTGTGGCCCGGCAAAAATTGTGGAACCAACTCAATTCATACAACCAGACAAAAGAAGAGTGACCCAAGCACTCATGACATGGAATGTGACCTGCACATATTCACAATTTCTTGCTCAGAGAACGCCCACTTGCTGTGTCTCGCTCTCGTCTTTCTATAATGATACGGTTGTACCCTGCCCTACATGTTCATGTGGCTGCCAGGGCAACGCATCTCTAACAGGGGACTGTGTAAATCCAGATTCACCACACCTAGCATCAGTTGTTTCCAACCCTGGACCTGGTAAAAATGGTATTACACCTTTGGTTCGATGTACTCGTCATATGTGCCCTATCCGAGTTCACTGGCATGTTAAGCTTAACTACAAGGAGTACTGGCGTGTGAAGGTCACTGTTACTAATTTCAATTACAGGATGAATTATTCTGATTGGAACTTGGTTATTCAACATCCAAACTTTGACAATCTGACCCAGCTTTTCAGTTTCAACTACCAGGCAATAACTCCCTACGGATCGATAAATGATACAGCAATGCTTTGGGGAGTTAAGTTCTACAATGATTTTCTCATGCAAGCTGGTCCTCTTGGTAATGTACAGTCAGAGCTACTATTCAGAAAGGATAAATCAACTTTCACTTTTGACAAGGGCTGGGCCTTCCCTCGAAGAGTCTATTTCAATGGTGACGTTTGTGTGATGCCACAACCTGATGCTTATCCATGGTTACCAAATGCTGGTTCCAGGCAAGAGGTTTCCCTGCTTGTTTTGATGATGACCTCATTGGTGGCCTTAGTATTACATGCATATACTTAA 1239 0.4366 MVMLHVQISCISCYISAVVTMNNFQKYRHISAPGWSLGWTWAKKEVIWSMVGAQATEQGDCSRFKGNIPHCCKKNPIVVDLLPGTPYNQQIANCCKGGVLSSWAQDQSKAVSAFQISVGSAGTTNKTVKLPQSFTLKAPGPGYTCGPAKIVEPTQFIQPDKRRVTQALMTWNVTCTYSQFLAQRTPTCCVSLSSFYNDTVVPCPTCSCGCQGNASLTGDCVNPDSPHLASVVSNPGPGKNGITPLVRCTRHMCPIRVHWHVKLNYKEYWRVKVTVTNFNYRMNYSDWNLVIQHPNFDNLTQLFSFNYQAITPYGSINDTAMLWGVKFYNDFLMQAGPLGNVQSELLFRKDKSTFTFDKGWAFPRRVYFNGDVCVMPQPDAYPWLPNAGSRQEVSLLVLMMTSLVALVLHAYT* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01272 412 PIRSF COBRA 3 412 IPR006918 GO:0010215|GO:0016020
Lapu4g01272 412 PANTHER PROTEIN COBRA 16 402 IPR006918 GO:0010215|GO:0016020
Lapu4g01272 412 Pfam COBRA-like protein 17 178 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01272 Lapu-Chr4 29679171 29682317 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01272 17 397 COBRA Gene Family AT5G60920 76.378 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01272 - - gmx:100815926 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g01272 4 29679171 29682317 Lapu1g01248 1 25323625 25334663 PCT
Lapu1g01247 1 25321026 25323556 Lapu4g01272 4 29679171 29682317 PCT