Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01271 ATGAGGCTTGTCATCTCAGCTCTTTGTGGTCTTGTGCTATTCTCTTGTGCAGTTGCTTATGATCCTTTGGATCCAAATGGAAACATAACAATCAAATGGGATGTCATGTCTTGGACACCAGATGGCTATGTGGCTGTGGTAACAGTTCACAATTTCCAAATGTTTCGGCACATCATGAATCCTGGATGGACCTTGGGATGGACATGGGCAAAGAAAGAAGTCATTTGGTCCATGGTAGGAGCTCAAGCCACAGAGCAAGGAGACTGCTCTAAGTTCAAAGGAAACATACCTCATTGCTGCAAGAAAATTCCAACAATTGTAGACCTACTCCCTGGTGTTCCTTACAACCAGCAATTCTCAAACTGCTGTAAGGGTGGAGTAGTGTCTGCATGGGGCCAAGATCCTTCACAAGCTATCTCATCCTTCCAAGTGAGCATAGGCCAAGCCGGTACCACAAACAAGACAGTTAAACTCCCCAAGAATTTCACTCTCTTGGCTCCTGGACCAGGCTATTCTTGTGGCCCTGCCAAGATTGTTCCTTCCACCACTTTCCTTACGCCTGACAAGCGCCGCAAGACTCAAGCACTAATGACATGGAATGTTACCTGCACATACTCACAGTTCCTGGCAAGAAAGAATCCAAGTTGTTGTGTATCTTTGTCATCCTTCTATAATGAAACCATTACCCCTTGTCCCTCTTGTGCCTGTGGCTGCCACAACAAGAAGAATTGTGTCAAGAGTGACTCCAAAATTCTCAGCATGGTCGGTGTTCACACTCCCAAGAAAGACAATGAACCATTGCTGCAGTGCACTCATCACATGTGTCCAATCAGGGTTCACTGGCATGTCAAGGTTAACTATAAGGAATATTGGAGAGTAAAGATTGCCATTACAAACTTCAATTACAGGATGAATCACTCCCTCTGGTCTCTTGCTGTTCAGCATCCAAATCTTAACAATCTCACCCAAGTTTTCAGTTTTAATTACAAGCCTCTTCTTCCCTATGGTTCCATAAATGACACTGGCATGTTCTATGGCATGAAATACTTCAATGATCTTTTAATGGAAGCTGGACCAACTGGGAATGTTCAATCAGAGTTGCTTCTTCAGAAGGACAAGGATACATTCACATTCAAGCAGGGGTGGGCTTTTCCTCGCAAGATCTACTTTAATGGTGATGAATGCATGATGCCCCCACCTGACACATACCCCTTTCTACCTAACTCAGCACCTGCAAGCCTAATTACCTTCCCAGCATTCATTTTCTTATTGCTTTTCTTTTTAGCAGTTTGGTGA 1296 0.4406 MRLVISALCGLVLFSCAVAYDPLDPNGNITIKWDVMSWTPDGYVAVVTVHNFQMFRHIMNPGWTLGWTWAKKEVIWSMVGAQATEQGDCSKFKGNIPHCCKKIPTIVDLLPGVPYNQQFSNCCKGGVVSAWGQDPSQAISSFQVSIGQAGTTNKTVKLPKNFTLLAPGPGYSCGPAKIVPSTTFLTPDKRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNETITPCPSCACGCHNKKNCVKSDSKILSMVGVHTPKKDNEPLLQCTHHMCPIRVHWHVKVNYKEYWRVKIAITNFNYRMNHSLWSLAVQHPNLNNLTQVFSFNYKPLLPYGSINDTGMFYGMKYFNDLLMEAGPTGNVQSELLLQKDKDTFTFKQGWAFPRKIYFNGDECMMPPPDTYPFLPNSAPASLITFPAFIFLLLFFLAVW* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01271 431 PIRSF COBRA 1 431 IPR006918 GO:0010215|GO:0016020
Lapu4g01271 431 PANTHER PROTEIN COBRA 8 423 IPR006918 GO:0010215|GO:0016020
Lapu4g01271 431 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0016020
Lapu4g01271 431 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01271 Lapu-Chr4 29675579 29678409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01271 1 430 COBRA Gene Family AT3G29810 67.873 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01271 - - gmx:100798678 860.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g01271 4 29675579 29678409 Lapu1g01247 1 25321026 25323556 PCT