Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01268 ATGGCTGTGTTCATGGCAATTGTAGGAGTAGTGCTGGTGCTCTGTTTTTGCTCTGCTCTCTTGAGGTGGAATGAAGTAAGGTACAGGAAGAAAGGTTTGCCTCCTGGCACAATGGGTTGGCCAGTTTTTGGGGAGACAACTGAGTTTCTCAAGCAGGGTCCAAACTTCATGAAAAACCAGAGAGCAAGAGTCTTCATCATGTTCACTTACATAAGTGGGAAAAAAAGTTTCTTTGGCACCACTTTGTATGGCAGTTTTTTCAAATCCCACATACTTGGTTGTCCTACCATTGTGTCCATGGATCCAGAGCTTAATAGATACATCCTAATGAATGAGGCAAAAGGTCTTGTTCCTGGATACCCTCAATCCATGTTAGATATCTTAGGCAAATGTAACATTGCAGCTGTTCATGGCTCCACCCACAAGTACATGAGAGGAGCACTGCTTTCCATCATTAGCCCCACCTTGATCAGAGATCAGATTTTACCAAAAATTGATGAGTTCATGAGAGCCCACCTTAGCAACTGGGATAACAAAGTCATCAACATTCAAGAGAAAACTAAGGAGATGGCCTTCCTCTCATCTCTGAAGCAGATTGCTGGCAGAGAATCTGTCTCATTATCTGAATCATTCATGACAGAGTTCTTTAAGCTTGTTCTAGGAACCATTTCTCTCCCTATTAACCTTCCTGGGACAAATTACCACCGTGGATTCCAGGCAAGGAAGACTATGGTCAACGTTCTGAGTAAGCTACTGGAGGAAAGAAGAGCATCCAACGAAACCTACCATGACATGCTTGGTTGCTTGATGGCAAGAGAGGAAAATAGATACAAACTAAGTGATGAAGAAATCATTGATCTGGTGATAACAGTGATATATTCTGGTTATGAAACTGTTTCAACAACATCAATGATGGCAGTGAAGTACCTCCATGACCATCCCAAAGCTCTTGAAGAACTGAGAAAAGAGCATTTGGCCATAAGGGAGAGGAAAAAGCCGGATGAGCCAATTGACTGGAATGACCTCAAGTCAATGAGTTTTACTCGTGCGGTGATTTTTGAGACCTCTAGATTGGCCACAATAGTTAATGGGGTCCTGAGGAAAACCACTCAAGACATGGAACTAAACGGCTATTTGATTCCCAAAGGATGGAGAATATATGTGTATACAAGAGAGATCAACTATGACCCTTTTCTATATCCCGATCCTCTGACTTTCAATCCATGGAGATGGCTGGATAAGAGTCTAGAATCAAAAAACTACTTCTTGATATTTGGAGGAGGCACCAGACTTTGTCCAGGAAAAGAGTTGGGAATAACAGAAATTTCCACTTTCTTACACTACTTTGTAACCAGATACAGGTGGGAAGAAGTGGGAGGGGAAAAACTAATGAAATTTCCTAGAGTTCAGGCACCTAATGGACTGCACATAAGGGTGACATCTTACTAA 1449 0.4203 MAVFMAIVGVVLVLCFCSALLRWNEVRYRKKGLPPGTMGWPVFGETTEFLKQGPNFMKNQRARVFIMFTYISGKKSFFGTTLYGSFFKSHILGCPTIVSMDPELNRYILMNEAKGLVPGYPQSMLDILGKCNIAAVHGSTHKYMRGALLSIISPTLIRDQILPKIDEFMRAHLSNWDNKVINIQEKTKEMAFLSSLKQIAGRESVSLSESFMTEFFKLVLGTISLPINLPGTNYHRGFQARKTMVNVLSKLLEERRASNETYHDMLGCLMAREENRYKLSDEEIIDLVITVIYSGYETVSTTSMMAVKYLHDHPKALEELRKEHLAIRERKKPDEPIDWNDLKSMSFTRAVIFETSRLATIVNGVLRKTTQDMELNGYLIPKGWRIYVYTREINYDPFLYPDPLTFNPWRWLDKSLESKNYFLIFGGGTRLCPGKELGITEISTFLHYFVTRYRWEEVGGEKLMKFPRVQAPNGLHIRVTSY* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01268 482 CDD CYP90-like 83 480 - -
Lapu4g01268 482 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01268 482 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01268 482 PRINTS P450 superfamily signature 432 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01268 482 PRINTS P450 superfamily signature 294 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01268 482 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506|GO:0016705
Lapu4g01268 482 PANTHER CYTOCHROME P450 26 30 460 - -
Lapu4g01268 482 FunFam Cytochrome P450 85A1 24 481 - -
Lapu4g01268 482 Pfam Cytochrome P450 83 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01268 482 Gene3D Cytochrome P450 24 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01268 482 SUPERFAMILY Cytochrome P450 27 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01268 482 PRINTS E-class P450 group I signature 80 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01268 482 PRINTS E-class P450 group I signature 432 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01268 482 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01268 482 PRINTS E-class P450 group I signature 283 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01268 482 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01268 482 PRINTS E-class P450 group I signature 422 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01268 Lapu-Chr4 29635651 29639642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01268 100 482 Cytochrome P450 AT5G38970 71.094 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01268 K09590 - gmx:100805958 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g01268 4 29635651 29639642 Lapu1g01245 1 25301940 25306955 PCT