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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Lapu4g01265
ATGGGGAGGGGAAGAGTGGAACTGAAAAGGATAGAGAACAAGATAAACAGGCAGGTAACGTTTGCGAAGAGGAGAAATGGCCTTCTCAAGAAAGCCTACGAGCTTTCTGTTCTCTGTGATGCTGAGGTTGCCCTTATCATCTTTTCCACCCGTGGCAAGCTTTATGAATTTTGCAGCAGTTCAAGCATGCTCAAAACACTTGAAAGGTACCAAAAGTGCAGCTATGGTGCAGTGGAAGTCAGCAAACCAGCAAAAGAGCTTGAGCAGAGCAGCTATCGTGAGTACTTGAAGCTGAAAGGAAGATTTGAATCTCTTCAGAGGACCCAAAGAAACCTTCTCGGGGAAGACTTGGGCCCTTTAAATACCAAAGAACTTGAGCAGCTTGAGAGGCAACTAGATTCATCTCTCAAGCAAGTGAGGTCCACAAAGACTCAATTCATGCTGGACCAGTTAGCTGATCTTCAAAATAAGGAGCAGATGTTGGTAGAAGCAAACAGAGCTTTGACCATGAAGCTGGATGAAATCAATTCAAGAAACCAATATAGGCAAACATGGGAAGCTGGTGATCAAAGTATGCCTTATGGTACTCAGAATGCTCACTCTCAAGGCTTCTTCCAGCCTTTGGAGTGCAATCCCACATTGCAGATAGGTTCCGATTACAGGTACAATCCTGAAGCCTCAGATCAGCTAACTGCCACGACTCAAGCTCAACAAGTGAACGGTTTTATTCCTGGATGGATGCTTTGA
747
0.4485
MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCSSSSMLKTLERYQKCSYGAVEVSKPAKELEQSSYREYLKLKGRFESLQRTQRNLLGEDLGPLNTKELEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEQMLVEANRALTMKLDEINSRNQYRQTWEAGDQSMPYGTQNAHSQGFFQPLECNPTLQIGSDYRYNPEASDQLTATTQAQQVNGFIPGWML*
249
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Lapu4g01265
248
CDD
MADS_MEF2_like
2
76
IPR033896
GO:0000977|GO:0045944
Lapu4g01265
248
Coils
Coil
125
145
-
-
Lapu4g01265
248
PANTHER
SERUM RESPONSE FACTOR HOMOLOG
3
170
-
-
Lapu4g01265
248
Pfam
SRF-type transcription factor (DNA-binding and dimerisation domain)
10
57
IPR002100
GO:0003677|GO:0046983
Lapu4g01265
248
SUPERFAMILY
SRF-like
2
77
IPR036879
GO:0003677|GO:0046983
Lapu4g01265
248
FunFam
MADS-box transcription factor 1
13
88
-
-
Lapu4g01265
248
SMART
madsneu2
1
60
IPR002100
GO:0003677|GO:0046983
Lapu4g01265
248
ProSiteProfiles
MADS-box domain profile.
1
61
IPR002100
GO:0003677|GO:0046983
Lapu4g01265
248
ProSiteProfiles
K-box domain profile.
88
178
IPR002487
GO:0003700|GO:0005634|GO:0006355
Lapu4g01265
248
ProSitePatterns
MADS-box domain signature.
3
57
IPR002100
GO:0003677|GO:0046983
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Lapu4g01265
Lapu-Chr4
29577278
29583241
Dispersed/Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Lapu4g01265
1
248
MADS-box Gene Family
AT5G15800
74.905
1.81e-125
355
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
MADS-MIKC
Lapu4g01265
K-box
1.9e-27
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Lapu4g01265
K09264
-
gmx:100785322
462.225
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Lapu4g01265
4
29577278
29583241
Lapu1g01237
1
25232831
25240886
PCT
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