Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01248 ATGACAATTGGAAATCTAGAACCCAAGGCAAAGAAGACAAAATCAAGGAAGAACAAAGTAGTTGTTGATGAGAAGGCACCTTTGATACCTAAGACTCATGAGGCTGATTCTTCGGGGTTTGATGATTTCAACGGTGCTTCATTTTCTGGGGCAGTTTTCAACTTGTCCACCACAATTATTGGTGCTGGGATCATGGGGTTGCCTGCATGTGTTAAAAAGTTGGGGATGGTGCCTGGTCTTCTTGCTATAATCTTAATTGCTTTGTTGACAGAGAAGTCAGTTGGGTTCATGATTAGGATTTCCCGGGCTGGGAATCTTTCTTCTTATGCGAACCTAGTGGGCGATACATTTGGCAAATTTGGAAAAGCCCTGGTGCAGATATGTGTCATAGTCAACAACATTGGAATGTTGATTATTTATATGATTATTATTGGTGATGTGATTTCTGGAACATCTTCTGGTGGAGTTCATCATTCTGGTTTACTTGAAGGATGGTTTGGAGTTCACTGGTGGACAGGACGTACATTTGTTCTTCTTTTTACAACACTAGCTGTGTTTGCACCTTTGTCCTGCTTCAAGCGAATTGATTCGTTGAGATACACTTCTGCATTATCATTTGGTTTAGCAGTTGTGTTTCTCGTCATTGCTGTGGGAATTTCAATTTTCAAGATTGCTATTGGAGGCATTGGGATGCCTAGATTATTCCCTGTCATTACTGATGTATCCTCAGTTTTTGAACTGTTCACTGTAACTCCTGTGGTTGTCACAGCCTATCTATGCCACTTCAATGTAAACCCCATAGACAATGAACTTGAGGACCCGTCACAGATACATGGGATTGTGCGAGCTTCCCTTGCTCTATGTGCTTCAGTGTACTTACTGACAAGCTTCTTTGGGTTCCTCCTATTTGGTGAAGGAACTCTTGATGATGTGCTTGCAAATTTTGACACTGATCTTGGGATTCCTTTTGGTTCTGTGCTCAATGATGCTGTTCGATCTAGCTATGCTGCACATCTTATGCTTGTATTTCCAGTTGTCTTCTATGCAGTGCGGATCAACCTTGATGGTCTCCTATTTCCATCATCTAGGCCTTTGGTTCTAGATAACGTCAGATTTGCAACAATTACTATAGCCCTTATTGCTTTTGCCTTTTGGGGAGCAAATTTCATACCCAGCATTTGGGATATTTTCCAGTTCACTGGAGCAACGGCTGCAGCATGTTTAGCATTCATATTTCCAGCTGCTGTCATCCTCAAGGATCGTTACAACATTGCAACTAGAAGGGACAAGATTCTATGTGTCATTATGATATTCCTTGCAGTCTTTGCAAATGTTGTGGCTATATACAGTGATGCATTTGCCCTGATCAAGAGTAGTATTAGCTCAATGCGAGCGTTTTCATGA 1404 0.4145 MTIGNLEPKAKKTKSRKNKVVVDEKAPLIPKTHEADSSGFDDFNGASFSGAVFNLSTTIIGAGIMGLPACVKKLGMVPGLLAIILIALLTEKSVGFMIRISRAGNLSSYANLVGDTFGKFGKALVQICVIVNNIGMLIIYMIIIGDVISGTSSGGVHHSGLLEGWFGVHWWTGRTFVLLFTTLAVFAPLSCFKRIDSLRYTSALSFGLAVVFLVIAVGISIFKIAIGGIGMPRLFPVITDVSSVFELFTVTPVVVTAYLCHFNVNPIDNELEDPSQIHGIVRASLALCASVYLLTSFFGFLLFGEGTLDDVLANFDTDLGIPFGSVLNDAVRSSYAAHLMLVFPVVFYAVRINLDGLLFPSSRPLVLDNVRFATITIALIAFAFWGANFIPSIWDIFQFTGATAAACLAFIFPAAVILKDRYNIATRRDKILCVIMIFLAVFANVVAIYSDAFALIKSSISSMRAFS* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01248 467 Pfam Transmembrane amino acid transporter protein 46 448 IPR013057 -
Lapu4g01248 467 PANTHER AMINO ACID TRANSPORTER 44 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01248 Lapu-Chr4 29360874 29364551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01248 21 458 Amino Acid or Auxin Permease AAAP Family AT5G38820 64.318 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01248 K14207 - gmx:100785277 752.281