Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01243 ATGCAAACCAGGGAGGTCTCAGCCCTCAATTATTTACTCCCTTCAAACCCTTGTCCCTACCCTCCTAACAACTACTCAGCCATCCAAAACAACATTCCCACATTTCAGTTTCAAAGATTCTCTAGCCAATTATATGGCCACAACCACAACACTCCCTACGATTTCAGTCCTCAATCATCATGCATCAGCAGCAACTCCACTTCTGATGAGGCAGATGAGCAACAATTGAGTCTCATCAACGAGAGGAAGCACAGGAGGATGATATCAAACCGGGAATCCGCGCGTAGGTCACGGATGAGGAAGCAGAAGCACCTTGATGAGCTTTGGTCGCAGGTTATGTGGCTCAGGAATGAGAACCACCAACTCATAGACAAGCTGAACCATGTCTCAGAGAGCCATGACCAAGTGCTCCAAGAGAATGCTCAGCTGAAAGAGGAAGCCTCAGAACTTCGCCAAATGATCAGGGACATGCAGATACATAGCCCTTGCCCCTCCTTCACCCCTTTCGAAGATGATGTCCCTTGCAGCTCAGCATATCTCAGATCCGATTCTTCAAACCAATCCAACTCATGTAACAACATGGACCTCCTTGGCTGA 597 0.4791 MQTREVSALNYLLPSNPCPYPPNNYSAIQNNIPTFQFQRFSSQLYGHNHNTPYDFSPQSSCISSNSTSDEADEQQLSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVMWLRNENHQLIDKLNHVSESHDQVLQENAQLKEEASELRQMIRDMQIHSPCPSFTPFEDDVPCSSAYLRSDSSNQSNSCNNMDLLG* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01243 198 Coils Coil 126 160 - -
Lapu4g01243 198 FunFam BZIP transcription factor 80 131 - -
Lapu4g01243 198 Pfam bZIP transcription factor 82 140 IPR004827 GO:0003700|GO:0006355
Lapu4g01243 198 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 80 143 IPR004827 GO:0003700|GO:0006355
Lapu4g01243 198 CDD bZIP_plant_GBF1 83 134 IPR045314 GO:0003700|GO:0006355
Lapu4g01243 198 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 85 100 IPR004827 GO:0003700|GO:0006355
Lapu4g01243 198 Gene3D - 80 135 - -
Lapu4g01243 198 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 9 164 IPR044521 -
Lapu4g01243 198 MobiDBLite consensus disorder prediction 179 198 - -
Lapu4g01243 198 SUPERFAMILY Leucine zipper domain 82 132 IPR046347 GO:0003700|GO:0006355
Lapu4g01243 198 SMART brlzneu 78 142 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01243 Lapu-Chr4 29300636 29301579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01243 46 173 bZIP Transcription Factor Family AT3G30530 69.118 1.02e-54 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu4g01243 bZIP_1 3.2e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01243 - - aprc:113867865 317.775