Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01231 GCGCCCTCCAATTCGGTTCACAAAGGGAAGAGAAGGGTCGTCGAGGAACCGGTCGATGAGGCCACGCTTCAGAAGCAGAGGAGGATGATCAAGAATCGAGAGTCCGCCGCTAGGTCCCGAGAACGCAAGCAGGCTTACACAGCGGAGCTCGAGTATGTGGTTCACCAGCTGGAGCAAGAGAATGCCCAGTTAGTTAATGAAGAGGCTGAGATGAGAAGGCAGAGGAAGAAGCAGCTCTTGGAGAACATCATTCCTGTTGAGGTGATGCCTAAACCCAGAAAAAGACTTCGGAGAGTAAATTCAGCATAA 309 0.5178 APSNSVHKGKRRVVEEPVDEATLQKQRRMIKNRESAARSRERKQAYTAELEYVVHQLEQENAQLVNEEAEMRRQRKKQLLENIIPVEVMPKPRKRLRRVNSA* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01231 102 Coils Coil 47 77 - -
Lapu4g01231 102 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 27 42 IPR004827 GO:0003700|GO:0006355
Lapu4g01231 102 Gene3D - 23 79 - -
Lapu4g01231 102 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 7 98 IPR043452 GO:0003700|GO:0045893
Lapu4g01231 102 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 22 74 IPR004827 GO:0003700|GO:0006355
Lapu4g01231 102 Pfam bZIP transcription factor 20 79 IPR004827 GO:0003700|GO:0006355
Lapu4g01231 102 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 23 83 - -
Lapu4g01231 102 SUPERFAMILY Leucine zipper domain 25 73 IPR046347 GO:0003700|GO:0006355
Lapu4g01231 102 SMART brlzneu 20 84 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01231 Lapu-Chr4 29162429 29164184 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01231 3 101 bZIP Transcription Factor Family AT1G03970 53.465 1.57e-24 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu4g01231 bZIP_1 1.1e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01231 K14432 - gmx:100101890 179.874