Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01207 ATGGCACGTTTAATCTATAACACCAAACCTCTACACAAAAAACTACTACTCCTCAACATATCCTTCATTTTCCTCATCTTTCTCTTCCTCAATGCCTATCTCCATGCTCCTAGTTCCCATGTTCATGCCTCCACAAATGTCTTCAACCATGTTAGAATACTCAGTGACATCAGTGTTGATGGTTGCACTGACCTTCACAAGTACTTAGACAATGACTCCAAGTGCTTATATGTGAAATCCCATGCTCACTGCAGGTCAAAAGGGTACATAAATTATCTGCAAATCTTTTACTGCAGCTTTGGCCATTCCCCAATTTTGGGTCATGCCCTGCTTATACTGTGGCTTGTGATTTTGTTTTATCTTCTGGGAGATACAGCTTCAAATTACTTTTGTAGTAACCTAGAAGGTCTGTCTGACATCTTGAGACTATCCCCCACCATAGCTGGGGTAACCTTGCTTTCGTTGGGAAATGGTGCACCTGATTTTTTTGCCAGTGTTGTTTCTTTCACAAGATCCAATGATGGTGCAGTTGGCCTCAATAGCATTCTGGGAGGGGCATTTTTTGTGTCCAGTGCTGTTTTGGGGATCATAAGCTTTCTTGTTAGTGCAAAGGAAATTGCAATTGACAAGGCTAGTTTCATTAGAGATGTCATTTTCTTCCTTTTCTCACTTTTCATCCTCCTTGTCATCATTTCCATTGGTAAAATTAGCTTGTTGGGTTCAATTTTTTATGTTTCTATTTACTTCCTCTATGTCTGTGCTGTCTCTGCCACACATTTCCTCTATGGAGGGGACAGGACAGAAGAAGAACTTGCCTCATCTTGTGATGACTTGACTGAGTCAGGCATACCCTTGCTTGGCTGTGTTGATGATGAGAAACCAAATGAATCAAATAAAGAGGTTGTTGAAGATGAAGGAGACAAGAAACAGGGTTTTGGTAATGATTCATTTGACTTTACTTACTTGAGCAAGTTTCTACATGTACTAGAGCTACCTCTTTGCTTGCCAAGAAGGCTTACAATACCGGTTGTGAGTGAGGAAGGTTGGTCAAAGCCATATGCTGTAATATCTGTGACTTTGGCACCAGTGTTGTTTGCAGCTCTTTGTAACACCCAAATGGAAAATGGGAGTTCAAGGAGTAGTCTTGTTTCATACTTGACAGCTGCTTTAATTGGCATTGTTTTGGGGAACATGGCATGTGTGACAACCAAGAGCACTAGTCCACCCAGAAAGTGCTTGTTTCCTTGGCTAGCTGGGGGTTTTTCAATGAGTGTAACATGGACTTATATCATTGCTGAGGAACTTGTTTCCCTCTTGGTTGCACTTGGAAATGTGATAGGGGTTAGTCCTTCAATCCTTGGACTAACTGTCCTAGCTTGGGGTAACTCTCTAGGAGATTTGATAGCCAATGGTGCAATGGCCAAGAATGGTGGAGCTGATGGGGCCCAAATAGCAGTTTCTGGTTGTTACGCAGGCCCTATGTTTAACATTTTGATGGGCTTGGGCTTGCCTCTTGTACTCTCAGCATGGTCTGAATACCCAGAGTCTTATGTGATTCCCAAGGACCCTTCTCTTTATGCAACACTTTTGTTCTTGATGGGAGGGGTGCTTTGGGCCCTTGTGATACTGATAAAGAAGAATATGGAGCTTGATAAGTCACTGGGAATTGGGCTCTTGACCATTTACCTCTGTTTTTTGTTTATAAGGATGGTCATTGCAATTGGTGTTATTAAATTCTAG 1740 0.4195 MARLIYNTKPLHKKLLLLNISFIFLIFLFLNAYLHAPSSHVHASTNVFNHVRILSDISVDGCTDLHKYLDNDSKCLYVKSHAHCRSKGYINYLQIFYCSFGHSPILGHALLILWLVILFYLLGDTASNYFCSNLEGLSDILRLSPTIAGVTLLSLGNGAPDFFASVVSFTRSNDGAVGLNSILGGAFFVSSAVLGIISFLVSAKEIAIDKASFIRDVIFFLFSLFILLVIISIGKISLLGSIFYVSIYFLYVCAVSATHFLYGGDRTEEELASSCDDLTESGIPLLGCVDDEKPNESNKEVVEDEGDKKQGFGNDSFDFTYLSKFLHVLELPLCLPRRLTIPVVSEEGWSKPYAVISVTLAPVLFAALCNTQMENGSSRSSLVSYLTAALIGIVLGNMACVTTKSTSPPRKCLFPWLAGGFSMSVTWTYIIAEELVSLLVALGNVIGVSPSILGLTVLAWGNSLGDLIANGAMAKNGGADGAQIAVSGCYAGPMFNILMGLGLPLVLSAWSEYPESYVIPKDPSLYATLLFLMGGVLWALVILIKKNMELDKSLGIGLLTIYLCFLFIRMVIAIGVIKF* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01207 579 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 18 578 - -
Lapu4g01207 579 Pfam Sodium/calcium exchanger protein 113 254 IPR004837 GO:0016020|GO:0055085
Lapu4g01207 579 Pfam Sodium/calcium exchanger protein 417 570 IPR004837 GO:0016020|GO:0055085
Lapu4g01207 579 Gene3D - 143 271 IPR044880 -
Lapu4g01207 579 Gene3D - 354 572 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01207 Lapu-Chr4 28885184 28887096 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01207 60 577 Antiporters AT5G17860 52.952 3.45e-177 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01207 K13754 - gmx:100818583 963.37