Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01206 ATGGCCATTACAGTTCGTGTGTCCAAAAGCATGGGATACACCGTGTTCTTGAACGCCTCTTTCCTGCTTGTGATTTGTTCTTTCATGATTATTCATGTCCACACCCCGGAACCAGAAGTTGTGGCTGTGACCAAAGTTTCTGCCTTTGGTAGCAGCAATGAGCAAGATTGTGAGAGCTTAGCAAGCCTAAGTGACTACAAAGCCAAGTGCTTGTTCCTGAAATCCAATGATCCTTGTGCTTCTGAGGGCTATATTGATTATCTATACCTTTTCTATTGCCAAATTGGGAGGTACCCTTCATTGGGTTACACCCTTCTATTTCTTTGGCTCCTAGTTCTGTTTTATTTGTTGGTTAATACAACTTCTCAATACTTTTGTCCCTCCCTTGAAAGCTTGTCCAAATTACTAAGGTTGTCGCCTACAATTGCTGGAGTCACCCTCCTCTCTCTTGGCAATGGTGCCTGTGACGTTTTCTCTAGCCTAGTCTCTTTCCAGGGAAGTGGGACCCGCAGTGTTGGTTTTAACACGGTTCTTGGGGGTGTTTCTTTTGTGTCCTGTGTTGTGGTGGGAACTGTGAGTATAGCAATACGTCAAAAGGGGGTTCAAGTTGTTAAGTGTGCGTTTGTGAGAGATGTTTATTTTCTACTTTTGGTTCTTTTTACCTTGTTTGGTATATTGATCTATGGTAAGATCAATATCCTTGGAGCAGTTGGTTTTACTATGATGTATGCTGTGTATGTAGTTATTGCTTATGTCTCTTCTGCCCGATGGAAGGAAGGTGTTGTAGGTGGTGGTGATGCTGCTGCTGAGAGGGGTGGTGGTGTTGATATTTTAGGTTGTGGACATGATTTGAATGTGCCTCTTCTCATTGGTGTGAAGGAAGAACCAATTGATTGTGTTGAAAATGGTGCTGGAGTATACGGTTTGAATGTGGAGAAGTACTCTTGCTGTATGAGATATTTAATGTGTCGAGTGCCACTTTATGTTCTGGAGGTACCCCTTTACTTGCCCAGGAGATTGACAATTCCTGTTGTGTGTGAAGAGAGATGGTCAAAGGTGTGTGCAGTTTTTTCAGTTATACTTGCTCCACTTCTCATGTCTGTCCTGTGGAGGAGTCCTTATAATGGAAACAGTTTCTTCAGCAAGAACCTTATTGTTTATGGAATTGGAGTCTTGGTGGGAACGATACTTGGTGTGACAGCATTTTTCACAACCAAAAAGTCAGGGCCACCAAAGAAGTTCCTATTTCCTTGGCTTGCAGGTGGGTTTGTGATGAGTGTGACATGGAGCTATATAATAGCTCAAGAGTTGGTGGGGTTGCTTGTTTCAATTGGGTACATATGTGGAATAAGTCCTTCTATACTTGGGTTAACAGTTATGGCCTGGGGGAACTCAATTGGGGATTTGATGACAAATTTAACTATGGCATTAAATGGTGGGCCAGAGGGTGCTCAAGTAGCAATATCAGGTTCCTATGCTGGTCCCATCTTCAATACCCTCATTGGTTTGGGTTTGTCTCTTGTCACCTCTACATGGTCAGAGTACCCTAAGCCTGTTGTCATCCCTAGAGACCCTTTTCTCTGGGAGACAATGCTGTTTTTGGTGGTTGGATTAGTTTGGGCACTTTTGGTTCTGATAAAAAGAGATATGAAGCTTGATGGACTCTTAGGAGGAGGGCTTTTGTTTGTGTACTTCCTTTCTCTGTTTACAAGGCTGATTCAGACAGAAGGGTCTCTCCAATAG 1743 0.4309 MAITVRVSKSMGYTVFLNASFLLVICSFMIIHVHTPEPEVVAVTKVSAFGSSNEQDCESLASLSDYKAKCLFLKSNDPCASEGYIDYLYLFYCQIGRYPSLGYTLLFLWLLVLFYLLVNTTSQYFCPSLESLSKLLRLSPTIAGVTLLSLGNGACDVFSSLVSFQGSGTRSVGFNTVLGGVSFVSCVVVGTVSIAIRQKGVQVVKCAFVRDVYFLLLVLFTLFGILIYGKINILGAVGFTMMYAVYVVIAYVSSARWKEGVVGGGDAAAERGGGVDILGCGHDLNVPLLIGVKEEPIDCVENGAGVYGLNVEKYSCCMRYLMCRVPLYVLEVPLYLPRRLTIPVVCEERWSKVCAVFSVILAPLLMSVLWRSPYNGNSFFSKNLIVYGIGVLVGTILGVTAFFTTKKSGPPKKFLFPWLAGGFVMSVTWSYIIAQELVGLLVSIGYICGISPSILGLTVMAWGNSIGDLMTNLTMALNGGPEGAQVAISGSYAGPIFNTLIGLGLSLVTSTWSEYPKPVVIPRDPFLWETMLFLVVGLVWALLVLIKRDMKLDGLLGGGLLFVYFLSLFTRLIQTEGSLQ* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01206 580 Pfam Sodium/calcium exchanger protein 419 571 IPR004837 GO:0016020|GO:0055085
Lapu4g01206 580 Pfam Sodium/calcium exchanger protein 107 251 IPR004837 GO:0016020|GO:0055085
Lapu4g01206 580 Gene3D - 353 572 IPR044880 -
Lapu4g01206 580 Gene3D - 138 266 IPR044880 -
Lapu4g01206 580 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 323 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01206 Lapu-Chr4 28769426 28771699 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01206 16 580 Antiporters AT5G17850 51.670 2.23e-161 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01206 K13754 - gmx:100813848 810.061