Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01192 ATGCCGCAGAAGCGGAAGCAGCGCCTTACCCCCATGCCAGATCCTCCTACTGCTTCCTCCTCCTCCGAATCCGAGGAAGATGGTCGCCGATTACCGTCTTCTCAACCGCATGCAACAGCAGCAGCAGCAGCAGCACAGGTTTCCTCCTCTGGAGAGGAAGACGATTCTTCCCAAGATGAAGACCAGGAGCAACTTTCCATTGTCCCCGCTTCTGCAAACCCTCCCTCCTCAGAATCTGAATTCGACACCGATTCCGAACCTACCCAAGCTAAACCCAAGCCCACAGACCAGGCCCTGCGTTCCCATGCGCCGGCCAAACTGGGATCCAAGCGCCCCGCCCACTCAGCTGACCCGAAACGCGCGAAGAAGAAAGCAACCGGCGCTCCTTCTTCCTCCGTTGCTAACGGCGAGGCGGAGGAGGACGGAAAGAAGTTCGGCAGCCAGTCAAAGATGTTCCAGAGGATCTGGAGCGAGGAAGACGAGCTCGGCATTCTTAAGGGCATGACTGAGTTCATCTCAAAGACAGGGCAAGAGCCTTACAGGTACGCCGACGCTTTCCACAGCTTCGTTAAGAAGTCACTACACGTGGAGGTTTCCAGCAACCAGCTCAAGGAGAAGATCCGACGGCTGAAGAAGAAGTTCGAGACTCATGTGGAGAAAGAGAAGAAGGGGATGAAGCCTCGGTTGTTGAAACCTCACGACAAGACTGTGTTTGAATTATCTAAGAAGATTTGGGATGAAGGACCCAATGGACTGGTGGAAAAGCCCAAGCCTAAAGAGAAAGCCGCTGCCAAGACTCCAAAGAAGGAATCTGCTACCATGAATATGACAAAACCCAAGCCCAAAGCGCCGTCGCAGCCATCAGCGCCGCCGCGGGCGTCGCCGGAGCCTGGAAAGCATGATAGTGGTGACGTGAGTTTGCTTTACCGCAAAATTTCTTGTTTTAAAGAGCTGGATGAGGATGAAATGAAGAGAGGACTTTCTCTAATTGGAGAATCGAAGAGGAAGGAATTGGAGAAAAAGTGGAAGATGTTGCAACATTCTGAGATGGAACTGATTGCGAATCGGTCTCTACTGATTGGGGAGCAGATTAAGTTGGTATCTGAAGCTCTTCACTCATCCAACAGTTAG 1131 0.5225 MPQKRKQRLTPMPDPPTASSSSESEEDGRRLPSSQPHATAAAAAAQVSSSGEEDDSSQDEDQEQLSIVPASANPPSSESEFDTDSEPTQAKPKPTDQALRSHAPAKLGSKRPAHSADPKRAKKKATGAPSSSVANGEAEEDGKKFGSQSKMFQRIWSEEDELGILKGMTEFISKTGQEPYRYADAFHSFVKKSLHVEVSSNQLKEKIRRLKKKFETHVEKEKKGMKPRLLKPHDKTVFELSKKIWDEGPNGLVEKPKPKEKAAAKTPKKESATMNMTKPKPKAPSQPSAPPRASPEPGKHDSGDVSLLYRKISCFKELDEDEMKRGLSLIGESKRKELEKKWKMLQHSEMELIANRSLLIGEQIKLVSEALHSSNS* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01192 376 Pfam Protein of unknown function, DUF573 152 246 IPR007592 GO:0006355
Lapu4g01192 376 Coils Coil 200 220 - -
Lapu4g01192 376 MobiDBLite consensus disorder prediction 1 150 - -
Lapu4g01192 376 PANTHER BNAANNG10740D PROTEIN-RELATED 42 369 IPR007592 GO:0006355
Lapu4g01192 376 MobiDBLite consensus disorder prediction 247 305 - -
Lapu4g01192 376 MobiDBLite consensus disorder prediction 62 83 - -
Lapu4g01192 376 MobiDBLite consensus disorder prediction 247 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01192 Lapu-Chr4 28602035 28605075 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01192 7 370 GeBP Transcription Factor Family AT1G61730 31.841 1.48e-37 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Lapu4g01192 DUF573 2.3e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01192 - - vun:114182157 437.187