Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01179 ATGGTTAACCCACCAAAAGATGAAACTGTCAGAATAAGAAAGCTTCTTGAGAAATTTGGCACCGTTGGTGATGCCAACGTCTTCTACTGGTTCCAAAACCGCCGTTCTCGCTCCCGCCGCCGCCAGCGCCAGATTCAGGCCACCCTTAACCAAGGTGGTGGCAGTGCAAGTGCTAATCCATATCAACACCACCATCAACACAACCCTGCTCTTGTTGCCAACATGGGTTTTGCTAGTGCTAATTCCTCTTTCCTTAGCCCTTCTTACATACCTGGTTCTTCTTCCTCCTCCTGTGGTGGCGGCAGTGGTAGTGGTGAAGAAAGCTTCGATGATTTCTTCTCGCCGTCTACTCAAATGGGTTTTTCTGGAATTGATCATCATACTTCAGCTGCTTCGTCACCAGTTTTGTACCCTCTTGAACCTTCCAATTTGAACTATCACTCTGGATTTGGGGGAATTTCAGGACTCATCACAGTGTTTATCAATGGGGTTCCAACAGAAGTTCCAAGGGGACCAATGGACATCAAAACAACGTTTGGTGAAGATGTAATGTTAGTTCATTCCTCTGGAATGTCAGTTCCTACCAATGAGTTTGGTTTCTTGATGCAGGGCTTGCAGCATGGTGAAAGCTACTTTGTGGTTTCAAAGCAAACACAAGTATGA 663 0.46 MVNPPKDETVRIRKLLEKFGTVGDANVFYWFQNRRSRSRRRQRQIQATLNQGGGSASANPYQHHHQHNPALVANMGFASANSSFLSPSYIPGSSSSSCGGGSGSGEESFDDFFSPSTQMGFSGIDHHTSAASSPVLYPLEPSNLNYHSGFGGISGLITVFINGVPTEVPRGPMDIKTTFGEDVMLVHSSGMSVPTNEFGFLMQGLQHGESYFVVSKQTQV* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01179 220 SUPERFAMILY Homeodomain-like 3 48 IPR009057 -
Lapu4g01179 220 MobiDBLite consensus disorder prediction 39 63 - -
Lapu4g01179 220 Pfam Homeodomain 16 40 IPR001356 GO:0003677
Lapu4g01179 220 ProSiteProfiles 'Homeobox' domain profile. 1 41 IPR001356 GO:0003677
Lapu4g01179 220 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 217 IPR044558 GO:0003700|GO:0048830
Lapu4g01179 220 MobiDBLite consensus disorder prediction 43 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01179 Lapu-Chr4 28448504 28450493 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01179 1 220 Wox Gene Family AT3G03660 52.402 3.07e-50 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lapu4g01179 Homeodomain 2.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01179 - - aprc:113866574 287.73