Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01178 ATGACGATGACTACCATTCTCTTCTTCATCTTTGTTCTTCCGTTCACATTTGCTGAGTTACGCGTTGGCTTCTACACCTCAACTTGTCCAAGAGCAGAAACAATTGTTCGTGAAGTTGTGGAAATGCATTTCAACAAGGATCAATCCATTGTTGGAGGCTTGCTTCGTTTGCACTTTCATGATTGCTTTGTTAGAGGCTGTGATGCCTCTATACTAATAGATCCAACTAGCACCAGGACATCGGAGAAGAATGCAGGACCGAACCTAACTGCTCGTGGATTTGAGATCATTGATGAAGCAAAAGCATTGTTGGAACAAGAGTGCCCTTCAACAGTTTCATGTGCAGATATTCTAGCACTAGCCACAAGAGATGCAGTGGAATTGGCAGGAGGGATCTGGTACAGAATCCCCACAGGAAGAAAAGATGGTCTATTATCTGATCCTGCACTGGTCAACCTTCCATCACCCTCACTCTCTGTATCAGGTGCTCTTCAATTTTTCACTGCAAAAGGGTTGACATTGGAGGACATGGTGACCCTTTTGGGAGGACACACTGTTGGTTTTGCTCATTGCAGTATGTTTCAAGATAGGCTTTCAGTTGTTCAAGGAAGAGTTGATCCCTCAATGGACCCTTCATTGGAAGAAAAGTTGGTGCAAATTTGTAAGTCAAAAGGGTCACAAAATAGTAACCCTCGTGTGTTTTTGGACCAAAACACATCCTTTTTATTTGACAATCAATTTTACAACCAAATGATTCTAAGTAGAGGGGTACTTCACATTGACCAGCAATTGGCTTTGGACCCATTGTCAAGAGACATGGTGCAGAATTTTGCAGCAAATGATAGTTCATTTCAAGAGAAATTTGCAAAGGCCATGATAAAGATGGGGAGCATTGGTGTTTTGGATGCAAATAATGGTGACATTAGAAGGAACTGTAGGGCTTTTAATATTCCTTTGTAG 960 0.4177 MTMTTILFFIFVLPFTFAELRVGFYTSTCPRAETIVREVVEMHFNKDQSIVGGLLRLHFHDCFVRGCDASILIDPTSTRTSEKNAGPNLTARGFEIIDEAKALLEQECPSTVSCADILALATRDAVELAGGIWYRIPTGRKDGLLSDPALVNLPSPSLSVSGALQFFTAKGLTLEDMVTLLGGHTVGFAHCSMFQDRLSVVQGRVDPSMDPSLEEKLVQICKSKGSQNSNPRVFLDQNTSFLFDNQFYNQMILSRGVLHIDQQLALDPLSRDMVQNFAANDSSFQEKFAKAMIKMGSIGVLDANNGDIRRNCRAFNIPL* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01178 319 PRINTS Haem peroxidase superfamily signature 176 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu4g01178 319 PRINTS Haem peroxidase superfamily signature 130 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu4g01178 319 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu4g01178 319 PRINTS Haem peroxidase superfamily signature 112 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu4g01178 319 PRINTS Haem peroxidase superfamily signature 51 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu4g01178 319 FunFam Peroxidase 23 162 - -
Lapu4g01178 319 CDD secretory_peroxidase 19 315 IPR033905 GO:0004601|GO:0042744
Lapu4g01178 319 Pfam Peroxidase 36 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu4g01178 319 ProSitePatterns Peroxidases proximal heme-ligand signature. 176 186 IPR019793 -
Lapu4g01178 319 Gene3D - 23 316 - -
Lapu4g01178 319 FunFam Peroxidase 154 295 - -
Lapu4g01178 319 PANTHER - 5 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g01178 319 Gene3D Peroxidase, domain 2 154 295 - -
Lapu4g01178 319 ProSiteProfiles Plant heme peroxidase family profile. 19 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu4g01178 319 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g01178 319 PRINTS Plant peroxidase signature 175 187 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g01178 319 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g01178 319 PRINTS Plant peroxidase signature 29 48 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g01178 319 PRINTS Plant peroxidase signature 290 303 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g01178 319 PRINTS Plant peroxidase signature 92 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g01178 319 PRINTS Plant peroxidase signature 53 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g01178 319 PRINTS Plant peroxidase signature 111 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g01178 319 PRINTS Plant peroxidase signature 130 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g01178 319 SUPERFAMILY Heme-dependent peroxidases 19 316 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lapu4g01178 319 ProSitePatterns Peroxidases active site signature. 51 62 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01178 Lapu-Chr4 28429454 28430869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01178 1 316 Peroxidase AT4G26010 53.292 2.92e-121 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01178 K00430 - gmx:100816459 509.22