Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01165 ATGTTCCAAGGTGGTATTATGAGACATTTTTGTTACCTTTATCTTGTGGTTCTTTCATGGTTTCTTTTCATTCCAAACACTCATGAATTACAAGCTGTTCAGACACAAGCCTTGTTGCAGTTAAGAGTTTATCTAGAGTATCCCTCCTCTTTACAAATTTGGGAGTATTACCAGGGGGACCTATGCAGCTTCTCTCCATCTGCAAACCTGAGCATTAAATGTGAAGATGATGAGGTAACTGAGCTTAAAATTACTGGTGAAAAATCTTTGAAGCCGCCATGGTTCAATGGATATGCAGTTCCTAATCAGACTCTATCCATGAATTTCTCCATTGATTCCTTTTTCATCACTTTAACAAAGTTGACCAGCTTAAGGGTTCTTAGCTTGGTGTCCTTGGGGATTTGGGGGCCACTTCCTGATAGCATTCACAGTTTGTCTTTGCTTCAAGTTTTGGATTTGAGTTCCAATTTCTTATTTGGAGCCATTCCACCAAAAATATCCACAATGGTAAAGCTTCATACACTGACCCTTGATGACAATTATTTTAACACCACAATGCCTGATTTGTTTGATTCTCTGTCCAATCTGAATATCTTGAGTGTGAAGAGCAATGGTTTAAAGGGTTCATTCCCCTCCTCACTGCGCAAAATTAAGACACTTGAAGTTATTTCCTTGTCCCACAATGAGTTGTCTGGTGACTTGCCTGGTCTCAGTTCTCTCACTGGCCTGCATGTTCTGGATTTAAGAGAAAACCATTTAGAATCTGAACTACCATTGTTGCCTAAATCTGTGGTCACTGTGCTGCTTAGCAATAACTCATTTTCAGGAGAGATACCTAAGCAGTTTCATGAACTGGATCAGCTTCAACATCTAGATCTTTCTTCAAATCACCTCACTAAGACACCCCCACCGACCTTGTTTTCTCTGCCAAAAATAAGTTATCTGAATCTGGCAAGCAATGTGCTAAGTGGGACCCTCCCAGACAACCTTAACTGTGGTAGCAAACTTGGGTTTGTGGACATTTCTCGTAACAAATTAAGTGGTGGACTTCCTTCTTGCTTGGCGAATACATCTGATAGTAGAGTTGTTAGATATGGTGGAAACTGTTTATCTGTTGATTCTCAGAACCAGCATAGAGGGTCTTATTGTAAAGAATCTACCTCTGAATGGAAGAGCTTTAAGATATGGGAAGCAGCAGTAGTAATGGGCATCATTGTTGTACTTGTTCTTGTGCTTTTGGTGTCGTGCATCTTCTTATGGAAAAAGTATCATTCCAGAAAGACAACTGGGCAGGATGTGTTGGTGAAGATTGTTCAAGATAACTCCTCTACAGGAGTTCCATCAGAGATCCTTGCAAATGCCAGATTTATTTCTCAAACAGTGAAGCTAGGGACACAAACTACTCCAACCTGTCGGCAATTTTCAATAGAGGAATTGAAGGAAGTCACAAAAAACTTTGACTTGTCAACTTATATTGGTCAAGGCTCCATAGGGAAGATGTACAAAGGTAAACTAGAGAATGGATCCTATGTGGCAATACGGTCTCTGGCTCTGTCAAAGAAATGCTCAATTCAAAATCTTAGAGCTAAATTGGATTTACTTTCAAAACTTCAACATCCAAATTTGGTTAGCCTTTTGGGACATTGTATTGATGGTGGAGAACAAGATGATTCCAATTCTCACAAACTTCATCTTGTATATGAGTACGTGCCAAATGGGAATTATCACACCCATCTGTCAGAATTTTCTGTAGAGAAGGCACTTAAGTGGTCTGATAGATTGGCAATTTTAATTGGAGTTGCAAAGGCAGTGCATTTCTTGCACACTGGTGTTATACCTGGCTGCTTTAGTAACCTACTAAAGACAAAGAATGTCTTGCTTGATGAACACCGCATTCCGAAACTAAGTGACTATGGTATGTCCATCATCATAGAAGACGTTGAAAAGTTTGAGGCAAAGGGTGAGAAATCAAAGCCATGCATAAGGATAAAAGAAGATGATGATGTTTATAATTTTGGATTTATATTATTCGAATCACTCGTTGGACCTATAGCATGCGACAAAGGTGAAACATTTTTCTTAAATGAAAAGGCATCCTTTGGAAGTCAAGATGGTAGAAGAAAGATTGTGGATCCTATAGTGTTGACCTCTTGCTCTCAAGAATCTTTATCAATTGCAATATCAATAACAACCAAATGCATATCTCCAGAATCTTCATTTCGTCCCTCTTTTGAAGATGTCTTGTGGAACTTGCAATATGCAGCTCAAGTCCAAGCCACAGCAGATGCAGATCAGAAATCAGATTAG 2307 0.3927 MFQGGIMRHFCYLYLVVLSWFLFIPNTHELQAVQTQALLQLRVYLEYPSSLQIWEYYQGDLCSFSPSANLSIKCEDDEVTELKITGEKSLKPPWFNGYAVPNQTLSMNFSIDSFFITLTKLTSLRVLSLVSLGIWGPLPDSIHSLSLLQVLDLSSNFLFGAIPPKISTMVKLHTLTLDDNYFNTTMPDLFDSLSNLNILSVKSNGLKGSFPSSLRKIKTLEVISLSHNELSGDLPGLSSLTGLHVLDLRENHLESELPLLPKSVVTVLLSNNSFSGEIPKQFHELDQLQHLDLSSNHLTKTPPPTLFSLPKISYLNLASNVLSGTLPDNLNCGSKLGFVDISRNKLSGGLPSCLANTSDSRVVRYGGNCLSVDSQNQHRGSYCKESTSEWKSFKIWEAAVVMGIIVVLVLVLLVSCIFLWKKYHSRKTTGQDVLVKIVQDNSSTGVPSEILANARFISQTVKLGTQTTPTCRQFSIEELKEVTKNFDLSTYIGQGSIGKMYKGKLENGSYVAIRSLALSKKCSIQNLRAKLDLLSKLQHPNLVSLLGHCIDGGEQDDSNSHKLHLVYEYVPNGNYHTHLSEFSVEKALKWSDRLAILIGVAKAVHFLHTGVIPGCFSNLLKTKNVLLDEHRIPKLSDYGMSIIIEDVEKFEAKGEKSKPCIRIKEDDDVYNFGFILFESLVGPIACDKGETFFLNEKASFGSQDGRRKIVDPIVLTSCSQESLSIAISITTKCISPESSFRPSFEDVLWNLQYAAQVQATADADQKSD* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01165 768 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 570 768 - -
Lapu4g01165 768 PANTHER UNNAMED PRODUCT 117 683 - -
Lapu4g01165 768 ProSiteProfiles Leucine-rich repeat profile. 287 308 IPR001611 GO:0005515
Lapu4g01165 768 Pfam Protein tyrosine and serine/threonine kinase 488 748 IPR001245 GO:0004672|GO:0006468
Lapu4g01165 768 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 449 569 - -
Lapu4g01165 768 Gene3D Ribonuclease Inhibitor 31 263 IPR032675 -
Lapu4g01165 768 Gene3D Transferase(Phosphotransferase) domain 1 570 768 - -
Lapu4g01165 768 ProSiteProfiles Leucine-rich repeat profile. 219 241 IPR001611 GO:0005515
Lapu4g01165 768 SUPERFAMILY Protein kinase-like (PK-like) 466 751 IPR011009 -
Lapu4g01165 768 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 264 388 - -
Lapu4g01165 768 ProSiteProfiles Protein kinase domain profile. 486 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g01165 768 SUPERFAMILY L domain-like 88 371 - -
Lapu4g01165 768 Gene3D Ribonuclease Inhibitor 264 376 IPR032675 -
Lapu4g01165 768 Gene3D Phosphorylase Kinase; domain 1 449 569 - -
Lapu4g01165 768 SMART LRR_typ_2 145 169 IPR003591 -
Lapu4g01165 768 SMART LRR_typ_2 240 263 IPR003591 -
Lapu4g01165 768 SMART LRR_typ_2 285 309 IPR003591 -
Lapu4g01165 768 Pfam Leucine rich repeat 171 230 IPR001611 GO:0005515
Lapu4g01165 768 Pfam Leucine rich repeat 265 322 IPR001611 GO:0005515
Lapu4g01165 768 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 31 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01165 Lapu-Chr4 28262136 28268356 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01165 7 696 Miscellaneous Gene Families AT5G14210 55.714 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Lapu4g01165 PK_Tyr_Ser-Thr 1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01165 - - gmx:100799183 1305.81