Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu4g01156 | ATGGCTGGAGGTGTTATTCGGCAGTTATTGAGGAGGAAAATCCAATCTCATTCTTCTAGTTCTTCTTTTACGTCACCCATTATCACAAAGAAAGATGGTGCCAACTCTACTGGCAGCAACTCCTTACGAGCAATTGCATTAATAGGAGCTGGTGTTTCGGGGATTTTAGGTTTTTCAACAACAGCATTCGCTGATGAAGCCGAGCATGGCCTGGCATGTCCCAGCTATCCATGGCCTCACACGGGCATCCTTAGTTCATATGATCATGCTTCGATTCGACGTGGTCATCAAGTTTATCAAGAAGTTTGTGCTTCTTGTCATTCCATGTCTTTGATATCATACCGTGATTTGGTTGGTGTCGCTTATACAGAGGAAGAGGTAAAGGCTATGGCAGCGGAGATTGAGGTGGTTGATGGCCCTAATGATGAGGGTGAGATGTTTACACGCCCTGGTAAACTTAGTGATCGCTTCCCTCAGCCATATGCAAATGAAGCTGCTGCTAGGTTTGCTAATGGAGGGGCCTATCCTCCTGATCTTAGTCTTATCACCAAGGCTCGACACAATGGTCAGAACTATGTGTTTTCACTTCTAACTGGCTATCGCGACCCTCCTGCTGGTGTTTCGATCAGAGAAGGACTGCACTATAATCCTTATTTTCCCGGTGGGGCCATTGCAATGCCTAAAATGCTTAATGATGGTGCTGTTGAATATGAAGATGGTACCCCAGCTACAGAATCTCAGATGGGTAAAGATATAGTATCATTCCTGACCTGGGCAGCCGAACCCGAGATGGAGGAGAGAAAACTGATGGGATTTAAATGGATATTCGTTCTATCACTTGCATTACTTCAAGCCGCCTACTACCGCCGTCTGCGGTGGTCTGTTCTAAAGTCTCGCAAGCTGGTTCTTGATGTTGTCAACTAG | 924 | 0.4589 | MAGGVIRQLLRRKIQSHSSSSSFTSPIITKKDGANSTGSNSLRAIALIGAGVSGILGFSTTAFADEAEHGLACPSYPWPHTGILSSYDHASIRRGHQVYQEVCASCHSMSLISYRDLVGVAYTEEEVKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANEAAARFANGGAYPPDLSLITKARHNGQNYVFSLLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATESQMGKDIVSFLTWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLRWSVLKSRKLVLDVVN* | 308 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu4g01156 | 307 | PRINTS | Cytochrome C1 signature | 174 | 198 | IPR002326 | GO:0009055|GO:0020037 | |
Lapu4g01156 | 307 | PRINTS | Cytochrome C1 signature | 212 | 223 | IPR002326 | GO:0009055|GO:0020037 | |
Lapu4g01156 | 307 | PRINTS | Cytochrome C1 signature | 96 | 115 | IPR002326 | GO:0009055|GO:0020037 | |
Lapu4g01156 | 307 | PRINTS | Cytochrome C1 signature | 243 | 262 | IPR002326 | GO:0009055|GO:0020037 | |
Lapu4g01156 | 307 | PRINTS | Cytochrome C1 signature | 76 | 95 | IPR002326 | GO:0009055|GO:0020037 | |
Lapu4g01156 | 307 | PRINTS | Cytochrome C1 signature | 141 | 161 | IPR002326 | GO:0009055|GO:0020037 | |
Lapu4g01156 | 307 | PRINTS | Cytochrome C1 signature | 262 | 277 | IPR002326 | GO:0009055|GO:0020037 | |
Lapu4g01156 | 307 | PRINTS | Cytochrome C1 signature | 223 | 242 | IPR002326 | GO:0009055|GO:0020037 | |
Lapu4g01156 | 307 | PANTHER | CYTOCHROME C1 | 28 | 305 | IPR002326 | GO:0009055|GO:0020037 | |
Lapu4g01156 | 307 | Gene3D | - | 67 | 262 | IPR036909 | GO:0009055|GO:0020037 | |
Lapu4g01156 | 307 | FunFam | Cytochrome c1, heme protein | 67 | 262 | - | - | |
Lapu4g01156 | 307 | ProSiteProfiles | Cytochrome c family profile. | 90 | 197 | IPR009056 | GO:0009055|GO:0020037 | |
Lapu4g01156 | 307 | SUPERFAMILY | Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor | 262 | 306 | IPR021157 | - | |
Lapu4g01156 | 307 | SUPERFAMILY | Cytochrome c | 71 | 261 | IPR036909 | GO:0009055|GO:0020037 | |
Lapu4g01156 | 307 | FunFam | Cytochrome c1, heme protein, mitochondrial | 263 | 307 | - | - | |
Lapu4g01156 | 307 | Pfam | Cytochrome C1 family | 78 | 294 | IPR002326 | GO:0009055|GO:0020037 | |
Lapu4g01156 | 307 | Gene3D | - | 263 | 306 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu4g01156 | Lapu-Chr4 | 28147135 | 28153910 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu4g01156 | 1 | 307 | Chloroplast and Mitochondria Gene Families | AT3G27240 | 84.039 | 1.00e-179 | 496 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu4g01156 | K00413 | - | gmx:100803087 | 580.867 |