Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01103 ATGTTCCCTTACAGTTCCAACCCCTACCCTTCCTTCCCTTCATCTTCTTCTTCATTCCATCCTTTTCCTTTCCTCAACCTTGAGAATGCTTCTGCAAGCAACACCCTTCTTCATGATCCACTTTCTGTGCCTTACTTACCAACTCATCACAACCCTCAAAGCATCCAAGAAGCACTGAGCAATTTGCCAGTCACGGATCATAACTGCGGTGGTGGAGGTTCTGCAATGACCAAACCTGACCCAAGTGCTGGTGGTGGTGCTCCTCACTATGGCCTTTCTTGTTTCCTCACAAAGAAGCCAGCTAAGAAAGACAGGCACAGCAAGATTTACACCTCTCAGGGTTTGAGGGACCGGAGGGTGAGGTTGTCCATTGAGATTGCCCGCAAGTTCTTTGATCTTCAGGACATGCTAGGGTTTGACAAAGCCAGCAACACCCTTGAGTGGCTCTTCAACAAGTCCAAGAGAGCAATTAAGGAGCTGGCAAGGAGCAAGAACAGCAACAACAGTGAAGATGGAGCCAAGAGCTTCTCTTCTTCATCTGAGTGTGATGATGACTGTGAAGTGGTTTCAGAGATCAAGCAGAAACAACAACTCATCACTGGTGATGCTGCTACTCCACATAACCTACAACAAGGGTTAGATTCAAGCGATAACAAGTCACCGACATTGCTGGCTGCAAGGGAGAGGATGAAGTTGAAAAGGACACAGAAGGAACCTGCAAAGATGAAGGAGTCAAGGGAGAAAGCAAGAGCAAGAGCAAGGGAAAGAACTAGTAACAAGATTATGTGCAATGTTAACACCAACACAGGGAGGGTGCAACAAGACTTGAGGAAAAAGTGCCCTGCAATTGAAAATAACCACTCTCAAATCATGCATCAATCAAGGTCACCCACTCAACCTCACCACCTTGTGGGAAGTGAAGCACCCAGAGATGACTTCAACGTTATTGAGGAATCCATTGTGATCAAGAGAAAGTTGAAGCCCTCATTGATGTCCTCTTCTCATCACCATCACCAAAACCTTATGATCCCCAAGGAACCACCATGTTTCAACAACAACAGTGAGTATCACCCTTTCTCCAATTTATCTCCAAATTGGGATGCTAATGGATCCACTGGCCGCTCCAACTTCTGTGCTATAGCTAGTATGAATCTATCCACAGGGCTTCAAATCTTTGGAAAGTCTTGGGAGGAGTGCACCAATCCACGTTTACACTAG 1218 0.4606 MFPYSSNPYPSFPSSSSSFHPFPFLNLENASASNTLLHDPLSVPYLPTHHNPQSIQEALSNLPVTDHNCGGGGSAMTKPDPSAGGGAPHYGLSCFLTKKPAKKDRHSKIYTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFNKSKRAIKELARSKNSNNSEDGAKSFSSSSECDDDCEVVSEIKQKQQLITGDAATPHNLQQGLDSSDNKSPTLLAARERMKLKRTQKEPAKMKESREKARARARERTSNKIMCNVNTNTGRVQQDLRKKCPAIENNHSQIMHQSRSPTQPHHLVGSEAPRDDFNVIEESIVIKRKLKPSLMSSSHHHHQNLMIPKEPPCFNNNSEYHPFSNLSPNWDANGSTGRSNFCAIASMNLSTGLQIFGKSWEECTNPRLH* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01103 405 MobiDBLite consensus disorder prediction 161 181 - -
Lapu4g01103 405 MobiDBLite consensus disorder prediction 232 255 - -
Lapu4g01103 405 ProSiteProfiles R domain profile. 243 260 IPR017888 -
Lapu4g01103 405 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 80 354 IPR005333 GO:0003700
Lapu4g01103 405 ProSiteProfiles TCP domain profile. 102 160 IPR017887 -
Lapu4g01103 405 Pfam TCP family transcription factor 101 261 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01103 Lapu-Chr4 27457376 27459567 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01103 97 369 TCP Transcription Factor Family AT1G67260 33.813 6.46e-32 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lapu4g01103 TCP 1.7e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01103 - - gmx:100801549 649.047