Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01098 ATGGCAGAAGCTCATGCTCGTAATGCTAATGGTGGTCATGACAATGGTGCTTCAGGAAGCAGACGTAGAGGTCCTGTTTCAAGACGTGCCATGGCAACACAAACGCAAGATGAACCAATGGTAGCATCTTCACCTGCAACACCATGTGGGGCTTGCAAGTTCTTGAGGAGGAAGTGCATTGGGGGGTGCATCTTTGCACCCCACTTTGGCACTGACCAAGGTGCAGCCAAGTTCGCAGCCGTGCACAAGGTCTTTGGGGCTAGCAATGTGTCAAAGCTCTTGTCCAACATTCCGGTGAGCCGCCGCCATGAAGCGGCGACGACCATTTCCTATGAGGCTCAGGCAAGGCTGGCTGATCCTGTTTATGGTTGTGTCTCCACCATTCTTGCTCTGCAACAACAGGTAGCATCTATGCAAGGAGAGCTAGGTATGTTGCAAAGTGAGTTGGTGAATAGTAGGTTTGCCTATGCAAGTGCTATTCAGAGCACACAACTACAGCAACCAAACATGAATAATAATGCAGCAACACTACAACCAGCATATTCCAACAACTCATGTGCTTCCACCAACCTTATCAACTTGAGCAGCTTCAACAATAACCCTTCTGGCTTTGACCTTGCAATGGACACAGCACCCTCATCAACCACTTTGGACCCTCTTCAACTCACAACACTCTCCAAATGTGAGGAAGATGATGAAGAAGAAGAAAGCAGGACTCACCACACCTTCAACCACCATTAA 741 0.4858 MAEAHARNANGGHDNGASGSRRRGPVSRRAMATQTQDEPMVASSPATPCGACKFLRRKCIGGCIFAPHFGTDQGAAKFAAVHKVFGASNVSKLLSNIPVSRRHEAATTISYEAQARLADPVYGCVSTILALQQQVASMQGELGMLQSELVNSRFAYASAIQSTQLQQPNMNNNAATLQPAYSNNSCASTNLINLSSFNNNPSGFDLAMDTAPSSTTLDPLQLTTLSKCEEDDEEEESRTHHTFNHH* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01098 246 PANTHER LOB DOMAIN CONTAINING PROTEIN 46 235 - -
Lapu4g01098 246 MobiDBLite consensus disorder prediction 1 42 - -
Lapu4g01098 246 Pfam Lateral organ boundaries (LOB) domain 48 146 IPR004883 -
Lapu4g01098 246 Coils Coil 128 148 - -
Lapu4g01098 246 ProSiteProfiles LOB domain profile. 47 149 IPR004883 -
Lapu4g01098 246 MobiDBLite consensus disorder prediction 227 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01098 Lapu-Chr4 27360148 27363445 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01098 47 236 AS2 family AT3G03760 57.949 4.31e-70 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu4g01098 LOB 1.5e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01098 - - gmx:100813769 359.377