Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01097 ATGGGAAATAGGCTTCATCTTTCGGTGCTTCTGGTCTTGGTAACAGTTTTACTTTCAATCTTTCACTCGGAGCAACTGCGATCCTCTCACTCTCAGACCCTTCTAAGAATTCAACAGCTATTGAACTTTCCAGCTGTTTTAAGCAGCTGGAACAACAGCACAGACTTTTGCAGCACAGACTCAACATCTTCTCTCACTGTTGTTTGCTATGATGGCACCATAACCCAGCTGCACATAGTTGGTGAAACAAGAGCTCTACTTCTCCCCAAAAATTTCTCAATAAATTCCTTTTTCACAACACTGGTTAGGCTTCCCAGTCTGAAAGTCCTCACTTTGGTTTCCCTTGGCATATGGGGTCCATTGCCGGGTAAGATTGCTTATTTGTCATCACTGGAAATTTTCAATGCGAGTTCAAATTTCCTATATGGTTCCATCCCTCCAGAGTTCTCATTATTGTCACATCTCCAAACACTTATTCTAGATGACAACATGTTTTCTGGTCATCTTCCTGAATGGCTTGATTCCTTTCCAGCCTTAACTGTGTTAAGTTTGAAAAACAACTTGTTCAATGGTTCACTTCCGGATTCGCTGAGTAGCCTGGAGAATATAAGAATTCTTTCACTTTCTCATAACCATTTTTATGGACCAGTGCCTGATTTGCGCCGTTTGACGAATCTCCAAGTGCTGGAATTGGATGATAATGCTTTTGGACATCGGTTTCCCCAGCTTGGTGACAAACTGGTTACTCTAGTACTAAGAAACAATAAGTTCAGGTCTAGCATCCCTGATGAAATCAGCTCATGTTATCAACTTGAGAGACTTGACATCTCAGCAAACACATTTGTTGGACCATTCCAACTAGCACTAATGTCACTTCCTTCTATTACTTATCTGAACATTTCTAGGAACAAATTAACAGGAATGCTTTTGGAGAATCTGTCTTGCAATCCTGGACTTGAAGCAGTGGATTTATCCTCAAATCTTTTGACTGGGATCTTACCAAAATGTTTAATGTCAAATTCCAATGATAGGACTGTCCTGTATGCTAGAAATTGTCTAGAAGAGACAAATCAAAATCAGCATGCACTACCCTTTTGCCACACTGAAGCCATAGCTGTGGGAGTAGTACCAGATGGAAAGCAACATAAACGAGTATCTAAGGCAGTTCTCTCCCTTGGGATAGTATGTGGAACTTTTGGAGGAGTAGCAATTGTTGCCCTGTTTTTCTTTATTATCAGAAGAGGAAATGTCAAAAGAAAAATCAAGAATTCTCCAACAAAATTCATAACAGAGAATGCAGCTTCAGGATACACCTCTAAGTTACTCTCTGATTCAAGGTACATATCTCAAACAATGAAGTTCGCAACAGTTGATCTGCCACCTTATCGAGCTTTCTCACTGGATGAGATAGTAGCAGCTACAAAAAACTTTGACTTGGCTTGTTTTATGGGTGAAGGTTCTCAGGGAAAGATGCACAGAGGTCAACTAAAGGATGGTTTACTTGTTGCCATTAGAAGTGTCAAAATCACTGCAAGCTACAACACTCAAGATTTTATGCATAGCATAGAGCAGATATTCAAATACAGGCATCGTCATTTAGTCAGTGTTCTTGGACACTGCTTTGAATGTTATTTGGATGATTCAAGTGTCAGCAGCATATTTATTGTCTTTGAGTATGTACCAAATGGCACACTCAGGAACTGGATCTCAGATAGGTACTATAGAAAATCCCTGACATGGACGCAACGCATAGAAGCTGCAATTGGAGTAGCAAAGGGCATCCAATATTTGCATACAGGAATTGTACCTGGTGTATATTCAAACAATCTCAAAATCACAGATGTTTTACTTGACCAAAATTTTGTTGCAAAAATCAAAAGTTATGACCCGCCTTTGTTATCACTCATGAAGAAGGTTGGGCAGGGTAATCCTTCTAGAGAATTCAAAATTCCTAGCGCTAACAAAAATGTAAAACAGGAAGACAAGTCTGATGTATATGACTTTGGAGTAATCCTGCTGGAAATCATTCTAGGAAGGACAATAAAGTCAAGGAATGTGAACACTTTAAGGGATCTGTTGCAAGCAAGCATAACAGCTGATAGTGAAGCTAGGAGGAGCATTATAGATCCAGCAGTTCAAAAGGTGTGCTTAGATCAATCATTGAAGACAATGATGGAAATTTGTGTGAGGTGCCTAGTCAAAGAGCCAGCAGAGAGGCTCTCTATTGAGGATGTTTTGTGGAATCTGCAGTTTGCAGCTCAAGTCCAAGATGCATGGATAGGAGACACTCAAAGTAGTAGTGATGGCTCACCAATCTCTCCTTTAGCATCTATACGAATGACCTTCCATTAG 2352 0.4005 MGNRLHLSVLLVLVTVLLSIFHSEQLRSSHSQTLLRIQQLLNFPAVLSSWNNSTDFCSTDSTSSLTVVCYDGTITQLHIVGETRALLLPKNFSINSFFTTLVRLPSLKVLTLVSLGIWGPLPGKIAYLSSLEIFNASSNFLYGSIPPEFSLLSHLQTLILDDNMFSGHLPEWLDSFPALTVLSLKNNLFNGSLPDSLSSLENIRILSLSHNHFYGPVPDLRRLTNLQVLELDDNAFGHRFPQLGDKLVTLVLRNNKFRSSIPDEISSCYQLERLDISANTFVGPFQLALMSLPSITYLNISRNKLTGMLLENLSCNPGLEAVDLSSNLLTGILPKCLMSNSNDRTVLYARNCLEETNQNQHALPFCHTEAIAVGVVPDGKQHKRVSKAVLSLGIVCGTFGGVAIVALFFFIIRRGNVKRKIKNSPTKFITENAASGYTSKLLSDSRYISQTMKFATVDLPPYRAFSLDEIVAATKNFDLACFMGEGSQGKMHRGQLKDGLLVAIRSVKITASYNTQDFMHSIEQIFKYRHRHLVSVLGHCFECYLDDSSVSSIFIVFEYVPNGTLRNWISDRYYRKSLTWTQRIEAAIGVAKGIQYLHTGIVPGVYSNNLKITDVLLDQNFVAKIKSYDPPLLSLMKKVGQGNPSREFKIPSANKNVKQEDKSDVYDFGVILLEIILGRTIKSRNVNTLRDLLQASITADSEARRSIIDPAVQKVCLDQSLKTMMEICVRCLVKEPAERLSIEDVLWNLQFAAQVQDAWIGDTQSSSDGSPISPLASIRMTFH* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01097 783 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 27 245 - -
Lapu4g01097 783 Gene3D Transferase(Phosphotransferase) domain 1 560 766 - -
Lapu4g01097 783 PANTHER UNNAMED PRODUCT 85 679 - -
Lapu4g01097 783 Gene3D Ribonuclease Inhibitor 27 244 IPR032675 -
Lapu4g01097 783 Pfam Leucine rich repeat 153 213 IPR001611 GO:0005515
Lapu4g01097 783 Pfam Leucine rich repeat 270 329 IPR001611 GO:0005515
Lapu4g01097 783 ProSiteProfiles Protein kinase domain profile. 477 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g01097 783 SUPERFAMILY Protein kinase-like (PK-like) 457 751 IPR011009 -
Lapu4g01097 783 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 450 559 - -
Lapu4g01097 783 Pfam Protein tyrosine and serine/threonine kinase 483 746 IPR001245 GO:0004672|GO:0006468
Lapu4g01097 783 SUPERFAMILY L domain-like 101 353 - -
Lapu4g01097 783 Gene3D Phosphorylase Kinase; domain 1 438 559 - -
Lapu4g01097 783 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 560 765 - -
Lapu4g01097 783 Gene3D Ribonuclease Inhibitor 245 361 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01097 Lapu-Chr4 27344698 27351175 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01097 43 777 Miscellaneous Gene Families AT3G03770 60.459 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Lapu4g01097 PK_Tyr_Ser-Thr 1.3e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01097 - - gmx:100813207 1318.91