Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01096 ATGGTTTTCTGTGTAATAAAAGGTGAACTCTTGACAACCAAGGAAGCCCAGAGGAGACATCAATACTATGATGAACTGGCTTCGCAGGGTCGTTTCTCTTCTGCTCTTTTAGTTGTAAGGGAACATCTTCCTTCTGGAAAGGCATGTCTGAGATTGAATATCGATGCAACAAGATTAGGAAACATTGCACGATTTGTAAATCATTCATGTGACGGTGGTAATTTAAGTACAAAGCTAGTTAGAAGTTCAGGAGCTTTGTTCCCCCGCCTATGCTTCTTTGCTTCGAAAGATATCCAAGTGGATGAAGAGCTTACTTTTAGCTATGGAGAAATCAGGAAAAGGACAAAGGGGTTGCCGTGCTTTTGCAATAGCCCTTCTTGCCTTGGAACGTTGCCCTCTGAAGACACTTGA 411 0.4234 MVFCVIKGELLTTKEAQRRHQYYDELASQGRFSSALLVVREHLPSGKACLRLNIDATRLGNIARFVNHSCDGGNLSTKLVRSSGALFPRLCFFASKDIQVDEELTFSYGEIRKRTKGLPCFCNSPSCLGTLPSEDT* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01096 136 SUPERFAMILY SET domain 4 129 IPR046341 -
Lapu4g01096 136 SMART set_7 9 115 IPR001214 GO:0005515
Lapu4g01096 136 Gene3D SET domain 2 136 IPR046341 -
Lapu4g01096 136 ProSiteProfiles Post-SET domain profile. 116 132 IPR003616 -
Lapu4g01096 136 ProSiteProfiles SET domain profile. 17 109 IPR001214 GO:0005515
Lapu4g01096 136 Pfam SET domain 48 109 IPR001214 GO:0005515
Lapu4g01096 136 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUV39H 6 131 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01096 4 131 C2H2 Transcription Factor Family AT2G23740 31.852 1.54e-10 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lapu4g01096 SET 1.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01096 K11433 - gmx:100786871 248.44