Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01088 ATGGCCGCCCTCTCCAATCGCCGCCGCACGGTCCCGTCGGAAGATGTTGACACCCAGGCGATAACTGCAGACTCCGTTTCCACCAGCTACAGCACGACGCACCTCCAGGTCGCCGGAAAAACCAGCCTCCGACCTCCCCTCGCTCGGCAAGAATCTCTCCGCCGAAACATTGAACACGTCGCCGCAGAAACTTACTTGATTACTCGACTCGCCTTCACGCTTCTTCGCTACCTCGGGATTGGTTACCGTTGGATTACACAATTACTTGCCCTTGGATGTTATGCCATGCTACTTATGCCCGGTTTTTTACAAGTTGCATATTACTATTTCTCCTCAAGCAAGGTAAAGCGAAGCATTGTTTATGGAGATCAGCCTAGAAACAGGTTGGATCTGTATCTACCATCCGATATTGATGAACCTAAGCCAGTTTTGATATTTGTAACTGGGGGAGCATGGATTATTGGGTATAAAGCATGGGGTGCCCTTTTAGGACTACAGTTGGCAGAAAGAGGCATTATAGTGGCATGCTTAGATTACAGAAATTTTCCTCAAGGGACCATCAGTGACATGATAAATGATACTTCTCAGGGAATTTCCTTTATCATCAACAACATAGCTAATTATGGAGGTGACCCTAACAGAGTTTATCTAATGGGACAATCTGCCGGTGCTCATATTTCCTCTTGCACTTTACTGGAGCAAGCAGCCAGAGAATCAGAAAAAGGACAAAATGTTTCTTGGAGCATTTCCCAGATCAAAGCTTATTTTGGTTTATCTGGAGGATATAACTTGTTGGATTTAGTGGATCACTTCCACAATCGTGGCTTGTATCGTCGGATTTTTTTAAGCATAATGGAAGGTGAAAAGTCTTTGAAGGTATTTTCTCCTGAAATCAAAATTCAAGATCCGTGCCTCAAAAGTTCCATTCCTCACTTCCCACCTGTATATCTAGTCCATGGAACTGCAGATTATTCCATACCATCAGTTGCCAGTGAACGGTTTGCTGATGCTCTTAAGAAGGCAGGGGTAAGAGCTGAGTTGATTTTGTGTGAGGGGAAGGCTCATACAGATTTGTTTCTACAAGATCCACTCCGAGGCGGCATTGATTACCTATTCGATCATGCAGTTGCCATTATACATTCCGATGATAGTGATGCTCTTGCAAAGGATGCCTTTGCACCCCCAAGAAAACGGTTTGTTCCTGAGATTTTATTAAAGTTGGCAAGCAAGATAAGTCCCTTCTAA 1245 0.445 MAALSNRRRTVPSEDVDTQAITADSVSTSYSTTHLQVAGKTSLRPPLARQESLRRNIEHVAAETYLITRLAFTLLRYLGIGYRWITQLLALGCYAMLLMPGFLQVAYYYFSSSKVKRSIVYGDQPRNRLDLYLPSDIDEPKPVLIFVTGGAWIIGYKAWGALLGLQLAERGIIVACLDYRNFPQGTISDMINDTSQGISFIINNIANYGGDPNRVYLMGQSAGAHISSCTLLEQAARESEKGQNVSWSISQIKAYFGLSGGYNLLDLVDHFHNRGLYRRIFLSIMEGEKSLKVFSPEIKIQDPCLKSSIPHFPPVYLVHGTADYSIPSVASERFADALKKAGVRAELILCEGKAHTDLFLQDPLRGGIDYLFDHAVAIIHSDDSDALAKDAFAPPRKRFVPEILLKLASKISPF* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01088 414 Gene3D alpha/beta hydrolase 106 362 IPR029058 -
Lapu4g01088 414 Pfam BD-FAE 129 338 - -
Lapu4g01088 414 SUPERFAMILY alpha/beta-Hydrolases 109 364 IPR029058 -
Lapu4g01088 414 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 64 363 - -
Lapu4g01088 414 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 110 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01088 Lapu-Chr4 27198623 27213987 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01088 49 414 Carbohydrate Esterase AT1G26120 66.120 7.19e-180 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01088 K15889 - gmx:100788814 711.064