Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01062 ATGGAATATTCCCAGTTCCATGCTGTTTTGCTTTTGTCCATCTTTGTGGGAATTGGGTTAGCTTCTTCTCCCATAAAGGATCAGTTAAGGGATAGGATTACGAAGCTGCCAGGTCAACCAGAGAATGTGTTGTTTGCTCAGTACTCTGGCTATGTGACTGTGAATGAGGAAGCTGGGAGAGCATTGTTTTATTGGCTGGTAGAGTCACAAGCTAGTAGTTCAAAACCACTAGTTTTGTGGCTTAATGGTGGCCCTGGATGCTCCTCTATTGCTTATGGAGCAGCTGAAGAAATTGGTCCTTTTCGAATCAATCCTGATGGGAAATCACTTTACTCCAATCCTTATGCTTGGAACAATTTGGCAAATATACTCTTCCTTGATTCTCCTGCTGGTGTTGGCTTTTCATATTCCAACACAACATCAGATCTGTATACAGCAGGTGACCAAAGAACAGCTGAAGATGCATATATATTCCTTGTTAATTGGCTTGAAAGATTTCCTCAGTACAAGCACAGAGATTTCTACATTGCTGGAGAAAGTTATGCAGGCCACTATGTTCCTCAGTTGTCTCAAGTTATTTATCGCAAAAATAAAGGAATCGAGAACCCAGACATAAACTTCAAGGGGTTTATGGTTGGAAATGCTGTGATAGATGATTACCATGACTATATTGGAACATTTGAGTACTGGTGGGTCAATGGTTTGATTTCAGATGACACATATAAAATGCTGAGAATTGCGTGTGAGTTTGATTCCGCTCAGCATCCACCAGAGAAATGTGTGAAAGCTTTTGAACTTGCAAGTTTGGAGCAGGGGAACATTGATCCATATAGCATTTATACACCTGTGTGCAATGATACATCTGCATCACTCAAACGCAGTTTAAGGGGTCGCTTAGCATGGCTGTCTGGAGCATACGATCCTTGTACGGAGAAGTACTCTGAGGTGTATTTCAATCGTCCAGAAGTGCAGAAGGCTCTTCATGCCAACGTAACTGGGATTCCATATTCATGGAGTGGATGCAATGATATTGTCGTCGAAAATTGGGGCGATTCTCCGCTTTCTATGCTTCCAATCTATCAAGAAATTCTTCATGCTGGCCTCAGGATATGGGTGTTCAGCGGAGACACTGATTCAGTTGTGCCTGTAACCGCGTCTCGGTATTCAATTGCTTCCTTGAACCTACCTACCATCGTCAATTGGTACCCTTGGAATGATAATGGCCAGGTTGGTGGGTGGAGTCAAGTTTACAAGGGGCTTACATTGGTTACAATAAGAGGGGCAGGACATGAGGTTCCACTTCACAGACCTCGTCAAGCATTTACTCTTTTCAAATCATTCTTGGAGAACAATAACATGCCTTCGTCAAGTGCTAGCAGCCTTACTCTCCCAGCCCAATCACTGACCCATAAAATTAGATCAGTTAGGCCCAAAAGAAAGATCACTGTGCCATCATCCGTGCAGGACTTTTCTAGTTAG 1479 0.4293 MEYSQFHAVLLLSIFVGIGLASSPIKDQLRDRITKLPGQPENVLFAQYSGYVTVNEEAGRALFYWLVESQASSSKPLVLWLNGGPGCSSIAYGAAEEIGPFRINPDGKSLYSNPYAWNNLANILFLDSPAGVGFSYSNTTSDLYTAGDQRTAEDAYIFLVNWLERFPQYKHRDFYIAGESYAGHYVPQLSQVIYRKNKGIENPDINFKGFMVGNAVIDDYHDYIGTFEYWWVNGLISDDTYKMLRIACEFDSAQHPPEKCVKAFELASLEQGNIDPYSIYTPVCNDTSASLKRSLRGRLAWLSGAYDPCTEKYSEVYFNRPEVQKALHANVTGIPYSWSGCNDIVVENWGDSPLSMLPIYQEILHAGLRIWVFSGDTDSVVPVTASRYSIASLNLPTIVNWYPWNDNGQVGGWSQVYKGLTLVTIRGAGHEVPLHRPRQAFTLFKSFLENNNMPSSSASSLTLPAQSLTHKIRSVRPKRKITVPSSVQDFSS* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01062 492 SUPERFAMILY alpha/beta-Hydrolases 30 453 IPR029058 -
Lapu4g01062 492 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 32 437 IPR001563 GO:0004185|GO:0006508
Lapu4g01062 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 420 433 IPR001563 GO:0004185|GO:0006508
Lapu4g01062 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Lapu4g01062 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Lapu4g01062 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Lapu4g01062 492 FunFam Carboxypeptidase 27 286 - -
Lapu4g01062 492 ProSitePatterns Serine carboxypeptidases, serine active site. 176 183 IPR018202 GO:0004185
Lapu4g01062 492 ProSitePatterns Serine carboxypeptidases, histidine active site. 420 437 IPR033124 GO:0004185
Lapu4g01062 492 Gene3D - 356 449 - -
Lapu4g01062 492 Pfam Serine carboxypeptidase 37 450 IPR001563 GO:0004185|GO:0006508
Lapu4g01062 492 Gene3D - 309 346 - -
Lapu4g01062 492 FunFam Carboxypeptidase 356 450 - -
Lapu4g01062 492 Gene3D alpha/beta hydrolase 28 286 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01062 Lapu-Chr4 26733037 26739467 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01062 314 448 Calmodulin-binding Proteins AT2G22960 30.882 5.52e-14 68.6