Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01054 ATGGCTGCCAACACATTGATGAGTTCTGCTATCACAGCCTTCCCTTCTCTTCTTTCTTCCTCAAAATCAAGGTTTGCTTCTGCAGTCCCCATTTCCAGCTTTGGCACCAATGCCTCTTCTAGGTTTTCCATGACTGCAGACTGGATGCCCGGCCAGCCTAGACCCCCTTACCTTGATGGTTCAGCACCAGGTGACTTTGGATTCGACCCTCTTCGTCTTGGTGAAGTACCAGAGAATCTTGAGAGGTTCAAAGAGTCAGAACTCATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTTCCAGAGGCATTGGGCTTAGGAAATTGGGTAAAGGCTCAGGAATGGGCAGCAGTTCCTGGGGGCCAAGCAACCTACCTAGGAAACCCAGTTCCGTGGGGCACACTACCCACCGTTTTGGTCATTGAATTCCTTGCTATTTCCTTTGTAGAGCACCAAAGGAGCATGGAAAAAGACCCAGAGAAGAAGAAATACCCTGGTGGTGCTTTTGATCCTTTGGGATACTCCAAAGACCCTAAAAAATTCCATGAATACAAAGTCAAAGAAATTAAGAATGGTAAGAACCGACGTCTTGCTTTGTTGGCTTTTGTGGGATTCTGTGTTCAACAATCAGCTTATCCTGGAACTGGACCTTTGGAGAACTTGGCTACTCACTTGGCTGACCCATGGCACAACAACATTGGAAACATCCTTATTCCACAATCGATTTTGCCTTGA 744 0.4704 MAANTLMSSAITAFPSLLSSSKSRFASAVPISSFGTNASSRFSMTADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGNPVPWGTLPTVLVIEFLAISFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKKFHEYKVKEIKNGKNRRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGNILIPQSILP* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01054 247 Gene3D Chlorophyll a/b binding protein domain 49 238 - -
Lapu4g01054 247 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 43 238 IPR001344 GO:0009765|GO:0016020
Lapu4g01054 247 Pfam Chlorophyll A-B binding protein 55 212 IPR022796 -
Lapu4g01054 247 FunFam Chlorophyll a-b binding protein, chloroplastic 49 238 - -
Lapu4g01054 247 SUPERFAMILY Chlorophyll a-b binding protein 38 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01054 Lapu-Chr4 26632689 26635279 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01054 1 199 Chloroplast and Mitochondria Gene Families AT3G54890 80.597 2.29e-108 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01054 K08907 - gmx:100305992 469.544