Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01044 ATGGCTCACTCAGACTCTGAAACTTTGGGGCGCCATTCTCTGATTCCCAGCTTTCTCTATTCATCTCCCTCACCGCCGCAGAAGAAGATGACGGAGGCTTCGAGCTTCGCGGTTCATTCTCCGAGTGAGAAACGCAGCATAGAGATGTTTTCGCCGTCGTTCTACGCTGCTTGCACCATCGGAGGAACCCTCAGCTGTGGCCTCACGCACACCGCCATCACGCCTCTTGACGTTGTCAAATGCAACATACAGATTGACCCTGTCAAGTACAAGAACACCAGCACAGGATTTGGAGTCATGTTTAAGGAGCAAGGACTGAGGGGCTTTTACCGCGGATGGGCACCTACCCTGGTTGGTTACAGCGCACAGGGTGCCTTCAAATATGGATTCTATGAGTACTTCAAGAAGTACTATTCTGACATAGCTGGTCCAGAGTATGCAACCAAGTACAAGACATTGATTTACCTAGCCGGTGCAGCATCTTCTGAGTTGATTGCAGATGTTGCTCTTTGCCCATTTGAGGCTGTGAAGGTCAGAGTTCAAACACAGCCTGGCTTTGCTAGAGGCCTAGCTGATGGACTTCCAAAGTTGGTCAGAACTGAAGGAGTCTCAGGGCTGTACAAGGGAATTATGCCTCTATGGGGAAGACAGGTTCCATATACAATGATGAAGTTTGCTTCTTATGAGAACATAGTTGAGATGATATATAAGCATGTCATCCCCAAACCAAAACATGAATGCAGCAATTCCCTTCAACTAGGTGTGAGCATTGCCGGTGGGTACATGGCTGGTGTATTGTGTGCCATTGTCTCTCATCCCGCGGATAACCTCGTCTCTTTCCTTAACAATTCTAAAGGGGCGACAGTTGGTGAAGCTGTAAAGAAGCTTGGATTATGGGGTATGTTTACCCGTGGTCTACCTCTACGTATTCTTATGATTGGAACTCTCACAGGGGCACAGTGGGGAATATATGATTCATTCAAAGTTTTTGTGGGGCTGCCAACCACTGGTGGTGTTGCTCCTGCTCTTCCTGCTCCTGCTGCTAATTAG 1050 0.4819 MAHSDSETLGRHSLIPSFLYSSPSPPQKKMTEASSFAVHSPSEKRSIEMFSPSFYAACTIGGTLSCGLTHTAITPLDVVKCNIQIDPVKYKNTSTGFGVMFKEQGLRGFYRGWAPTLVGYSAQGAFKYGFYEYFKKYYSDIAGPEYATKYKTLIYLAGAASSELIADVALCPFEAVKVRVQTQPGFARGLADGLPKLVRTEGVSGLYKGIMPLWGRQVPYTMMKFASYENIVEMIYKHVIPKPKHECSNSLQLGVSIAGGYMAGVLCAIVSHPADNLVSFLNNSKGATVGEAVKKLGLWGMFTRGLPLRILMIGTLTGAQWGIYDSFKVFVGLPTTGGVAPALPAPAAN* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01044 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 53 137 IPR018108 -
Lapu4g01044 349 Gene3D Mitochondrial carrier domain 28 145 IPR023395 -
Lapu4g01044 349 Gene3D Mitochondrial carrier domain 146 332 IPR023395 -
Lapu4g01044 349 SUPERFAMILY Mitochondrial carrier 56 325 IPR023395 -
Lapu4g01044 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 251 330 IPR018108 -
Lapu4g01044 349 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 32 341 IPR044677 GO:0005315|GO:1990547
Lapu4g01044 349 Pfam Mitochondrial carrier protein 55 139 IPR018108 -
Lapu4g01044 349 Pfam Mitochondrial carrier protein 153 238 IPR018108 -
Lapu4g01044 349 FunFam Phosphate carrier protein, mitochondrial 53 331 - -
Lapu4g01044 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 150 234 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01044 Lapu-Chr4 26497975 26502170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01044 11 349 Chloroplast and Mitochondria Gene Families AT5G14040 69.022 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01044 K15102 - gmx:100804257 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00519 1 16766195 16770369 Lapu4g01044 4 26497975 26502170 PCT