Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01026 GGGAGGTACGCCGCCGAAATTCGCGACCCTTCCACCAAAGAAAGACATTGGTTGGGGACGTTCGACACCGCAGAAGAGGCCGCTCTAGCATACGACAGGGCGGCTCGCTCCATGCGCGGATCACGTGCCCGAACCAATTTTGTCTATCCCGACACTCAGCCGGGTTCCTCCGTCACCACCATCCTCTCCCCCGACGAACAAACTCAAGCCCAAATTCAAATCCATCAGGCCCAAGAAGACCTCTCCTCGTTACTAAACCCGAACCTCTTTTCACAACCTGACCCAAATCCGCAATTTTCCTTGGGCGGTCTGACTGATACCGGATCGGGTTATCCGTTTACCGGGTTTGACTCGGGTGATTACGTGGTGCATAGTCCACTTTTTAGTGCAATGCCACCTGTGTCGGATAACGTGGCAATGGGTCACGAGGGTTTTGATTTGGGAAGCTCTTCTTATTTTTTCCGAAATTAG 471 0.5287 GRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARSMRGSRARTNFVYPDTQPGSSVTTILSPDEQTQAQIQIHQAQEDLSSLLNPNLFSQPDPNPQFSLGGLTDTGSGYPFTGFDSGDYVVHSPLFSAMPPVSDNVAMGHEGFDLGSSSYFFRN* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01026 156 Pfam AP2 domain 1 40 IPR001471 GO:0003700|GO:0006355
Lapu4g01026 156 SMART rav1_2 1 54 IPR001471 GO:0003700|GO:0006355
Lapu4g01026 156 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 69 - -
Lapu4g01026 156 SUPERFAMILY DNA-binding domain 1 48 IPR016177 GO:0003677
Lapu4g01026 156 CDD AP2 1 47 IPR001471 GO:0003700|GO:0006355
Lapu4g01026 156 Gene3D AP2/ERF domain 1 49 IPR036955 GO:0003700|GO:0006355
Lapu4g01026 156 ProSiteProfiles AP2/ERF domain profile. 1 48 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01026 Lapu-Chr4 26268565 26269287 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01026 1 145 AP2-EREBP Transcription Factor Family AT5G13910 44.751 4.83e-38 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lapu4g01026 AP2 1.5e-08 CL0081