Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01007 ATGGGAACTGCTAATGACCATGATGCTCCTCCTCTACTTGAAGACCTTAAGGTGAGCATCCACAACTCCTCCATGATTTTCCCATCCAAAGAGACTGAGAGAAAGTCCTTGTTCTTGTCCAACATAGACAAGGTCCTCACCTTTGATGTGGAAACAGTTCACTTCTTTGGTGCCCACAAAGATTTTCCTCCCCATGTTGTCACAGAGAGGTTCAAGAATGCCCTAGAAGATGCCCTTGTGGTTTATGACTTCCTGGGTGGAAGATTGAAGCTCAACCATGAAACCAATAGGTTAGAGATGGATTGTACTCCAAAGGGGGCAGGGTTTGTGGTGGCTTCCAGTGAGTACAAACTGGATCAGATTGGGGATTTGGATTATCCAAACACAGCCTTTGCACAATTGGTGCACAAGAACAAGGATTTTCTTAAAGAGGGTGATGTTCCACTCTGTGTTGCCCAGGTAACATCCTTCAAGTGTGGTGGCTTTGCAATTGGCATTTCCACAAGCCACACTACCTTCGATGGCCTCAGCTTCAAGAACTTCCTCGACAACATAGCTTCCATAGCCGCTAAAAAGCCCTTGGCCGTGACGCCGTGCCACGACAGGCACCTCCTGGCCGCGCGATCCCCACCACGTGTCACCTTCCCTCACCCGGAGATGCTGAAGCTGAACGACCTCCCCAAGTCCAACATCTTCGAAGCCTCGACCGAACAGCTTAACTTCAAGGTCTTCAAATTAACCTCAAAAGACATCACAAAGCTGAAGGAAGAGGCCAGAGATTCAATTGGTGGTGACACGACCACACGCGTTACAGGCTTTAACGTTATCACCGCCCACATATGGAGATGCAAGGCACGATCATGCGATGATGATAACCCTAATAGGTCATCAACTATTCTGTATGCTGTGGATATACGTTCGAGGTTGGACCCTCCTTTGCCAGAATCTTACACGGGTAACGCAGTGTTAACGGCTTATGCCACAGCCACATGTAGGGAGCTAGAAGAATGGCCCTTCATGAGGTTGGTTGAAAGGGTGCGTGAGGGTGGCACTAGGATGACCAATGAGTACGCAAGGTCGATCATTGATTGGGGAGAGATGAACAAAGGGTTTCCAAATGGGGAGGTTTTGGTGTCATCATGGTGGAGATTAGGGTTTGAGGAGGTGGAGTATCCCTGGGGGAAGCCTAAGTATTGTTGCCCTGTGGTATACCACAGGAAGGATATTGTTTTGTTGTTTCCTCCTGTTGATGGAGGAGGTGATGGGGTGAGTATTATTGTGGCTCTTCCTCCTAAGCAAATGGACAAATTCTATGGACTATTCTATAAGTTCTTGGGTGTTTGA 1344 0.4799 MGTANDHDAPPLLEDLKVSIHNSSMIFPSKETERKSLFLSNIDKVLTFDVETVHFFGAHKDFPPHVVTERFKNALEDALVVYDFLGGRLKLNHETNRLEMDCTPKGAGFVVASSEYKLDQIGDLDYPNTAFAQLVHKNKDFLKEGDVPLCVAQVTSFKCGGFAIGISTSHTTFDGLSFKNFLDNIASIAAKKPLAVTPCHDRHLLAARSPPRVTFPHPEMLKLNDLPKSNIFEASTEQLNFKVFKLTSKDITKLKEEARDSIGGDTTTRVTGFNVITAHIWRCKARSCDDDNPNRSSTILYAVDIRSRLDPPLPESYTGNAVLTAYATATCRELEEWPFMRLVERVREGGTRMTNEYARSIIDWGEMNKGFPNGEVLVSSWWRLGFEEVEYPWGKPKYCCPVVYHRKDIVLLFPPVDGGGDGVSIIVALPPKQMDKFYGLFYKFLGV* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01007 447 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 24 437 - -
Lapu4g01007 447 Pfam Transferase family 16 438 - -
Lapu4g01007 447 Gene3D - 14 221 IPR023213 -
Lapu4g01007 447 Gene3D - 227 444 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01007 Lapu-Chr4 25921374 25926036 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01007 16 445 Monolignol Biosynthesis Gene Families AT5G48930 32.604 5.81e-56 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01007 K13065 - gmx:100305576 774.237