Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01004 ATGGTTAGTGCAATAAAAGCAGCCATTGGAGATTTTGTGTTGACTTTGGTTTGGGTCTTCTTTTCCTCCATGTTGGGGTTGGCCGCCGATGTCATAACAACAGCGCTTGATCTTCAGCATGCGTCTTACAAAGGTTTTGATTACGCTGGCGCTGTGATAATCACTTCGCTCATCTTTATCCTCGTTACCATCTTCACCTTCATTGGCAATGCCTTGGGCGGAGCCAGCTTCAACCCCACCGGTAATGCTTCATCCTACGCCGCTGGTATTGGCAATGACACCCTTTTCTCAATGGCTCTCCGGTTCCCTGCTCAGGTACTGGGCTCAGCGGGTGGTGTTCTGGCTGTTATGGAGTATATGCCACAGAAATACAAGCACTTGATTGTTGGGCCTTCTTTGAAGGTTAGCGTGCATACTGGAGCTCTTGCAGAAGGGGTGCTGACATTTGTGATCACATTTGTTGTTCTCCTCATCATGATCAGGGGTCCTCGTAGTGATGCGGCAAAGACTTTGTTGTTGGCAATCTCAACTGTGGTTTTGATCACTGTTGGTGCTAGTTACACGGGACCAGCTATGAACCCTGCCTTCGCATTTGGTTGGGCATACTTTGAGAAACGGCATGACAAATGGGACCACTTCTATGTATACTGGATCTGCCCATTCGTTGGATCAATACTGGCTGCATGGCTGTTTCGTATTGTCTTTCCCCCACCACCACCAGTGGTAAAGCAGAAGAAAGCCTAA 744 0.4825 MVSAIKAAIGDFVLTLVWVFFSSMLGLAADVITTALDLQHASYKGFDYAGAVIITSLIFILVTIFTFIGNALGGASFNPTGNASSYAAGIGNDTLFSMALRFPAQVLGSAGGVLAVMEYMPQKYKHLIVGPSLKVSVHTGALAEGVLTFVITFVVLLIMIRGPRSDAAKTLLLAISTVVLITVGASYTGPAMNPAFAFGWAYFEKRHDKWDHFYVYWICPFVGSILAAWLFRIVFPPPPPVVKQKKA* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01004 247 Pfam Major intrinsic protein 2 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu4g01004 247 SUPERFAMILY Aquaporin-like 3 242 IPR023271 -
Lapu4g01004 247 Gene3D Glycerol uptake facilitator protein. 1 243 IPR023271 -
Lapu4g01004 247 PANTHER AQUAPORIN SIP1-1 4 247 IPR044222 GO:0015250
Lapu4g01004 247 FunFam Aquaporin SIP1-1 2 247 - -
Lapu4g01004 247 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu4g01004 247 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu4g01004 247 PRINTS Major intrinsic protein family signature 58 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu4g01004 247 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu4g01004 247 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu4g01004 247 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01004 Lapu-Chr4 25850529 25855821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01004 2 246 Major Intrinsic Protein MIP AT5G18290 52.439 1.56e-82 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01004 K09875 - gmx:100788738 383.645