Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00992 ATGGCAATGGTGATTATCACAACCCTTTTGGTTATCTTGGTGACTCTGCTACTGAAGGCTGGTTATGACACCATTTCATGTTACTGGCTCACTCCAATGAGAATAAGGAAGATGATGGAGAAACAAGATGTGCATGGTCCTAAACCTAGTTTTCTCATTGGCAACATCATAGAGATGACTTCCCTTGTTTCAAGAGCAGTTTCTCAAGACATGAAAACCATCAGCCATGATATTGTTCCTCGTATTTTGCCACATTTTGTTGTCTGGTCCAACCAATATGGAAAGAGATTCTTATATTGGAATGGAATAGAACCAAGGTTGTGTCTAACAGACACTGCACTGATAAAGGAATTTCTGTCAAAGTACAACTCCGTATCTGGCAAATCATGGCAACAACAACAAGGTACCAAAAATTTCATTGGGAAAGGGTTGTTGATGGCCAATGGTGAAGATTGGCACCACCAACGTCACATGGTTGCCCCTGCATTCATGGGAGAGAGACTTAAGGGTTATGCTGGGAACATGGTGGAGTGCACAAAGGACATGCTTCAGTCACTGCACAATGCATTAGAAGGTGGCCAAAGTGAGGTGGAGATTGGAGAATACTTAACTGAACTCACTGCAGATATTATCTCAAGAACTGAGTTTGGCACAAGCTATAAAAAGGGAAAGCAAATATTCTATCTCCTCACACAACTTCAAACTCGTTGTGCTCAAGCAACTCGCCATCTTTTCCTTCCTGGAAGCAGGTTTTTCCCTAGTAAGTACAATAGAGAGATAAAGTGTATGAAGATGGAGGTGGAGAAACTGTTGGTGGAGATCATAGAGGGTAGGAAAGATTGTGTGGAGATGGGGAGAAGCAAATCATATGGGAATGATTTGCTGGGCATACTCTTGGATGAGATGAAGAAAGAGGGTGGAAGCTTCAATCTTCAACTAGTTATGGATGAATGCAAAACATTCTTCTTTGCTGGACATGAAACCACTGCACTCTTACTCACTTGGACAGTTATGTTGTTAGCATGCAATCCACATTGGCAAGACAAAGTCAGAGCTGAGATCAAAGAGACATTCAAAGGGGAAACTCCTTCAGTTGATCAACTCTCCAAGCTCACTCTGTTACACATGGTGATTAACGAGTCAATGAGGCTCTATCCACCTGCAACTGTGCTTCCAAGAATGGTTTTCAAAGACATTGAGTTGGGAGAGCTCCACATTCCCAAAGGTGTATCAATTTGGATTCCAGTGTTGGCCATTCACCACAGTAAAGAATTGTGGGGTGAAGATGCAGATGAGTTCAAACCTGAGAGGTTTGCTTCAAAATCATTCATGCCTGGTCGCTTCATACCCTTTGCTTCTGGCCCTAGAAACTGTGTTGGACAATCTTTTGCTATGATGGAAGCCAAGATCATACTGGCCATGTTCATCTCTCAGTTTAGCTTCACCATTTCTCAGACTTACAGGCATGCACCAGTGGTTGTCCTCACAATTAAACCCAAATATGGTGTCCAAGTTTGTTTGAAGCCTTTAGATCCCTAA 1539 0.4243 MAMVIITTLLVILVTLLLKAGYDTISCYWLTPMRIRKMMEKQDVHGPKPSFLIGNIIEMTSLVSRAVSQDMKTISHDIVPRILPHFVVWSNQYGKRFLYWNGIEPRLCLTDTALIKEFLSKYNSVSGKSWQQQQGTKNFIGKGLLMANGEDWHHQRHMVAPAFMGERLKGYAGNMVECTKDMLQSLHNALEGGQSEVEIGEYLTELTADIISRTEFGTSYKKGKQIFYLLTQLQTRCAQATRHLFLPGSRFFPSKYNREIKCMKMEVEKLLVEIIEGRKDCVEMGRSKSYGNDLLGILLDEMKKEGGSFNLQLVMDECKTFFFAGHETTALLLTWTVMLLACNPHWQDKVRAEIKETFKGETPSVDQLSKLTLLHMVINESMRLYPPATVLPRMVFKDIELGELHIPKGVSIWIPVLAIHHSKELWGEDADEFKPERFASKSFMPGRFIPFASGPRNCVGQSFAMMEAKIILAMFISQFSFTISQTYRHAPVVVLTIKPKYGVQVCLKPLDP* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00992 512 SUPERFAMILY Cytochrome P450 46 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00992 512 PANTHER CYTOCHROME P450 FAMILY MEMBER 17 502 - -
Lapu4g00992 512 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00992 512 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00992 512 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00992 512 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00992 512 Pfam Cytochrome P450 89 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00992 512 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00992 512 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00992 512 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00992 512 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00992 512 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00992 512 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00992 512 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00992 512 Gene3D Cytochrome P450 28 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00992 Lapu-Chr4 25552032 25557183 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00992 1 372 Cytochrome P450 AT5G38450 65.782 6.42e-168 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00992 K10717 - gmx:100812567 916.376