Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00959 ATGGACGAGGATCAAGAGATGGAGAGATTTGGAACGGAGAATGATTATGAGGGTGGTCAATGGATTGGTGGTGAATTTTACTACAAGAGTCGTAAAGAAAAGCGCACTCAGACCAAGGATGATGTTCTTTATGGAGTTTTTGCAGATTCCGATGACGAAGATGATTATTCAAGTAGAAAACGGAGGAACCGTGATTTCTCAAAGAAGCCAGATCTTACCAAGCCTGTGAATTTTGTGTCTACAGGCACTTTTATGCCCAATCAGGAAATTGATAATAAGTCCAAAGAGCAGAATGAGAAAGACGATTATGTTAGTGAGGATAGGCCGGGGTTAGGTTTAGGTTTTGGTATGGGGTCTGGTAGCATTTCTGGGTCTGGTTTAGGTTTTAATGCTGGCAATGCTGCAAATGGTTCAGAAAGAAATGATGATTCTGATGAAAATGGTCATGATAATTTTTTGCCTACAGCGTTTGGGAAGAAGATTAAGGAGGGGGCAATGAGAAGGGAAAGGGAACGGGAAAAGGAGAGGTTGGAGAAGAAGAGGGGGAAGCATAAAAGTTTAGTTCAAGATGGGTCTGGTAATGTGGGGGAATTTGAGAAGCATACGAAAGGGATAGGCATGAAGTTGTTGGAGATGATGGGTTATAAAGGCGGTGGGCTTGGGAAGAATGAGCAGGGTATTGTGGCTCCTATTGAGGCGAGACTGAGGGCCAAGAATTCTGGCATAGGGTTTAATGAGTCTAAGGACACTATGCCATTGCCGGTTCTGCAGCAAGAGAAGAAGAATGTGCTAGAAGTCTCCCAACCCGTGGTTAGCAAAACGAAGGAAAGGTTATGGTCAAAGCAAGCAAGGTTGAAGAAAAAAAAGGAGGAAGAGTACATAACTGCCGAGGAGTTGTTGGCAAGCAAGCAAGAACAAGAGTTGGAGGTTGTTCAGAAGGTATATGATATGAGGGGGCCACAGGTTCGAGTATTAACGAATTTGTCAGATTTGAATGCCGAGGAGAAAGCAAAAGAAAATGATATCCCAATGCCAGAACTTCAGCATAATGTAGCATTAATAGTCCGGTTGGCTGAGGCTGACATCCAAGAGATTGATAGAGATTTGAGGAGAGAGAGGGAGACAGCACTTAGCTTGAAAAAAGAAAAAGAGAAGTTAGAAACTGAGGCAGCGTTTCAAAAGAAGCAGCTGGATAATATGGAGGAAATAATGCATGTGTTAGACCGTGTTGGAGAAGAAAACACTTTGGGAACATTAACATTGGATTCCCTTGCTCAATGCTTTAGGGATTTACACAAAAGATCTGCTGATAACTACAAGTTGTGTAACTTGTCATGCATTGCTTGTTCATTTGCTCTACCCATGTTTATCAGAGTGTTCCAAGGATGGGATCCTCTTCGAAATCCATCTCATGGGTTGGAGTTGGTTTCAGAGTGGAAGACATTGCTTCAAGCAGAAGATTCAGTTGATATATGGGATGTATCATCACCTTATACTCAATTGGTTTCAGAGGTTGTATTGCCAGCTGTCAGAATATCTGGTATAAATACCTGGCAGGCTCGGGATCCTGAACCAATGTTATGGTTTCTGGAATTGTGGGAAAAGTTACTTCCTCAATCAGTCCTTGCAACCATATTAGACAATATAGTTATGCCAAAACTATCGAGTGCTGTGGATACTTGGGAACCACACCGTGAGACCATTCCTATTCACACTTGGGTGCATCCATGGCTACCTCTGCTGGGGCACAAGTTGGAGGGTATTTACCAGGTGATTCGTTTTAAATTGAGTACTGTTCTTGGTGCCTGGCACCCAAGTGATGGTTCTGCTTATGCTATATTGTCTCCTTGGAAGTCTGTATTTGATTCTGCTAGTTGGGAACAGCTTATGCTTCGTTTTATTGTACCAAAGTTGCAGCTTGTCTTGCAAGAGTTCCAAGTGAACCCAGCAAGTCAGAATCTTGATCAGTTTTACTGGGTAATGAACTGGGCTTCTGCTATTCCTATTCACCTGATGGTTGATATGATGGAGAAATTCTTCTTTGCCAAATGGCTTCAGGTTCTGTATCATTGGCTGTGCTCAAATCCTAATTTTGAAGAAGTTACAAAATGGTATTTGGGATGGAAAGAACTCATTCCAAAAGAACTGTTGGCAAATGAAAGTATCCGGTACCAGCTTAATCGCGGTCTTGATATGATGAACCAGGCTGTTGAAGGTATGGAGGTGGTCCAACCTGGTTTAAAGGAGAATATAAGCTATCTCAGGGTACTTGAGCAGAGGCAATTTGAGGCTCAACAGAAAGCTGCAGCCTATACTCAACAGCAAGCTGCTGCTAGTTTGGGTGGTGCAGTCAATGCTGATGGTGCTCATGAATTGAGCTTGAAAGAAGTCATTGAGGCTCATGCTCAGCAACATGGTTTGCTATTCAAGCTTAAACCTGGTAGAATGTACAATGGTCATCAGATATATGGCTTTGGTAATGTCAGCATAATAATAGACTCTCTAAATCAAAAGGTATATGCACAAAACGAAGAAATGTGGTCTATGGAATCTCTTCAAGGCTTGCTAGAGTTGCATAATAAATCCCTTAACAAAAGGCGCTGA 2604 0.4228 MDEDQEMERFGTENDYEGGQWIGGEFYYKSRKEKRTQTKDDVLYGVFADSDDEDDYSSRKRRNRDFSKKPDLTKPVNFVSTGTFMPNQEIDNKSKEQNEKDDYVSEDRPGLGLGFGMGSGSISGSGLGFNAGNAANGSERNDDSDENGHDNFLPTAFGKKIKEGAMRREREREKERLEKKRGKHKSLVQDGSGNVGEFEKHTKGIGMKLLEMMGYKGGGLGKNEQGIVAPIEARLRAKNSGIGFNESKDTMPLPVLQQEKKNVLEVSQPVVSKTKERLWSKQARLKKKKEEEYITAEELLASKQEQELEVVQKVYDMRGPQVRVLTNLSDLNAEEKAKENDIPMPELQHNVALIVRLAEADIQEIDRDLRRERETALSLKKEKEKLETEAAFQKKQLDNMEEIMHVLDRVGEENTLGTLTLDSLAQCFRDLHKRSADNYKLCNLSCIACSFALPMFIRVFQGWDPLRNPSHGLELVSEWKTLLQAEDSVDIWDVSSPYTQLVSEVVLPAVRISGINTWQARDPEPMLWFLELWEKLLPQSVLATILDNIVMPKLSSAVDTWEPHRETIPIHTWVHPWLPLLGHKLEGIYQVIRFKLSTVLGAWHPSDGSAYAILSPWKSVFDSASWEQLMLRFIVPKLQLVLQEFQVNPASQNLDQFYWVMNWASAIPIHLMVDMMEKFFFAKWLQVLYHWLCSNPNFEEVTKWYLGWKELIPKELLANESIRYQLNRGLDMMNQAVEGMEVVQPGLKENISYLRVLEQRQFEAQQKAAAYTQQQAAASLGGAVNADGAHELSLKEVIEAHAQQHGLLFKLKPGRMYNGHQIYGFGNVSIIIDSLNQKVYAQNEEMWSMESLQGLLELHNKSLNKRR* 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00959 867 Pfam GC-rich sequence DNA-binding factor-like protein 421 688 IPR022783 -
Lapu4g00959 867 Coils Coil 286 306 - -
Lapu4g00959 867 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 1 854 IPR045211 GO:0000390
Lapu4g00959 867 MobiDBLite consensus disorder prediction 1 20 - -
Lapu4g00959 867 MobiDBLite consensus disorder prediction 74 91 - -
Lapu4g00959 867 Coils Coil 167 190 - -
Lapu4g00959 867 ProSiteProfiles G-patch domain profile. 202 247 IPR000467 GO:0003676
Lapu4g00959 867 Coils Coil 355 403 - -
Lapu4g00959 867 MobiDBLite consensus disorder prediction 44 108 - -
Lapu4g00959 867 Pfam G-patch domain 202 243 IPR000467 GO:0003676
Lapu4g00959 867 MobiDBLite consensus disorder prediction 92 107 - -
Lapu4g00959 867 Pfam Tuftelin interacting protein N terminal 4 102 IPR022159 -
Lapu4g00959 867 MobiDBLite consensus disorder prediction 161 187 - -
Lapu4g00959 867 SMART G-patch_5 200 245 IPR000467 GO:0003676
Lapu4g00959 867 PIRSF TFIP11 1 862 IPR024933 -
Lapu4g00959 867 MobiDBLite consensus disorder prediction 133 195 - -
Lapu4g00959 867 MobiDBLite consensus disorder prediction 52 71 - -
Lapu4g00959 867 Coils Coil 754 774 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00959 202 249 C2H2 Transcription Factor Family AT5G26610 45.833 5.07e-07 50.4