Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00958 ATGGAGGATCAATCGAAATTGGACCCTAGTCCTCTCAAAAAAATGGTGGCGGTTTCATCCATCGCCGCCGGTATTCAATTTGGATGGGCACTGCAACTCTCTCTTCTAACGCCCTACGTCCAAACCCTAGGTGTTCCTCACGCCTGGGCCTCCTTCATCTGGCTCTGTGGCCCCATCTCCGGCCTCCTTGTTCAGCCCATCGTAGGCTACAGCAGTGACCGATGCACATCTTCCTTCGGCCGCCGCCGCCCCTTTATCCTCTTCGGCGCCATCGCCGTCGCCATCTCCGTTTTCCTTATCGGCTACGCTGCCGATATAGGACACATGGCTGGCGATGACATCACCCAGAAAACCCGTCCACGTGCCGTTGCCGTCTTCGTCATCGGCTTCTGGATCCTTGATGTTGCCAACAACATGCTCCAGGGTCCCTGCCGCGCCTTCCTCGGTGACCTGGCTGCCGGCGACGAGAAAAAAACGAGAGCCGCCAACGCGTTCTTCTCGTTTTTCATGGCTGTCGGCAACATCCTGGGCTATGCCGCAGGATCCTATGACGGTATTCACAAGATCTTCCCTTTCACAGAAACCGAGGCATGCGACGTCTTCTGCGCAAACCTAAAGAGCTGCTTCTTCTTCTCCATCGTTCTTCTTCTTTTTTTGTGCTTCGTCGTTCTCACTTGCGTGAGCGACCCTCAGTTTACACCGGCAGCTGAGGAGAAGGACGTTGATGGGGAAGGGAATACGCACTATACTTGCTTCCTGGGAGAGCTGTTTGTTGCATTCAAGGGACTGCAGAAGCCAATGTGGATGCTGATGCTGGTGACTGCTATTAACTGGGTTGCGTGGTTCCCTTATGTGTTGTTCGACACTGATTGGATGGGTCGTGAGGTGTACGGTGGTGATGTAGGGCAGAAGGCATATGATTCTGGTGTGCATGCAGGTTCTATGGGCCTCCTGTTGAACTCGGTGGTGTTGGCTGTGATGTCCTTGGGTGTGGAACCATTGGGTCGCATGGTTGGTGGAGCCAAGTGGTTGTGGGCTATCGTTAATGTTGTTCTCGCAGTTGGCATGGCAATGACCGTGCTCATCACAAAAATCGCTGAGCAGCAACGAGCACTCAACCCTGCTCTCATTGGAGACCCTTCCACGGATGTGAAAGCTGGAGCCTTGGCATTCTTCTCCGTCCTTGGTGTTCCTCTTGCCGTTACGTATAGTGTCCCCTTTGCTCTAGCATCTATCTACTCCAGCAGCTCAGGAGCAGGGCAAGGTTTATCTTTGGGTCTTCTCAATGTTGCAATTGTGGTTCCTCAGATGCTTGTGTCGGCAATTAGTGGACCATGGGATGCCATGTTTGGTGGTGGAAACTTGCCGGCGTTTGTGTTAGGCGCGGTGGCGGCCGCCATCAGTGCGATACTGGCGGTTGTGCTGCTTCCAAACCCGAAAGGTGATGAAGTGAAGGCTTCCACCGTCTCCATGGGGAGTTTCCATTAA 1488 0.537 MEDQSKLDPSPLKKMVAVSSIAAGIQFGWALQLSLLTPYVQTLGVPHAWASFIWLCGPISGLLVQPIVGYSSDRCTSSFGRRRPFILFGAIAVAISVFLIGYAADIGHMAGDDITQKTRPRAVAVFVIGFWILDVANNMLQGPCRAFLGDLAAGDEKKTRAANAFFSFFMAVGNILGYAAGSYDGIHKIFPFTETEACDVFCANLKSCFFFSIVLLLFLCFVVLTCVSDPQFTPAAEEKDVDGEGNTHYTCFLGELFVAFKGLQKPMWMLMLVTAINWVAWFPYVLFDTDWMGREVYGGDVGQKAYDSGVHAGSMGLLLNSVVLAVMSLGVEPLGRMVGGAKWLWAIVNVVLAVGMAMTVLITKIAEQQRALNPALIGDPSTDVKAGALAFFSVLGVPLAVTYSVPFALASIYSSSSGAGQGLSLGLLNVAIVVPQMLVSAISGPWDAMFGGGNLPAFVLGAVAAAISAILAVVLLPNPKGDEVKASTVSMGSFH* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00958 495 NCBIfam sucrose/proton symporter 11 481 IPR005989 GO:0005886|GO:0008515|GO:0015770
Lapu4g00958 495 CDD MFS_SLC45_SUC 15 472 - -
Lapu4g00958 495 PANTHER SUGAR TRANSPORTER 12 475 - -
Lapu4g00958 495 FunFam Sucrose transport protein 9 476 - -
Lapu4g00958 495 Pfam MFS/sugar transport protein 27 202 - -
Lapu4g00958 495 SUPERFAMILY MFS general substrate transporter 13 483 IPR036259 -
Lapu4g00958 495 Gene3D MFS general substrate transporter like domains 7 476 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00958 Lapu-Chr4 25002565 25004549 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00958 1 495 Sucrose Transporter Gene Family AT1G71880 63.419 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00958 K15378 - gmx:100785899 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00958 4 25002565 25004549 Lapu4g00958 4 25002565 25004549 ECH