Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00953 ATGGAAATTAGCATCACATCTAGAGAAACCATTAAACCATCACTTCCCACTTCTGCAGAATGCAAAACCCAAAAATTATGTTTGTTTGATGTGTTTCAACTCAACATCTATTTTCCATTAATCCTGTTTTACAGTAAAACCACTACCCTTCAAGGATTCTCAGATGTCTCAACTCAATTGAAGAAATCACTATCTGAGGCACTAACCATTTTCTACCCTCTTGGAGGCAGAAGAAGTGATTACTTTTCCATTGATTGTAATGATGAAGGTGCAATTTACATGGAAGCTTCAGTGAATACCAGCATGGAAGTGTTCTTAAAACCACCAAAATTAGAAATGCTAAACCAATTACTTCCATGTGAACCTAACAAGTTGCATCCTCACCAGGAAATCTTGCCCCAGTTACTTGTTCAAGTAACCATTTTCCAATGTGGAGGAATAGCTATTGGCTTGTGCAACCTCCACATTCTCTTGGATGCATATTCTTGCAGTGCCTTCTTGAAAACCTGGTTTGCCATTTGCAAAGGGTCAAAGGAAGAAATATCATGGCCAGATTTCTTTTCTGCTTCTTCTTCCTTCCCTCCAAGAAATACTACTGGTGTACGTGCTGGCATGTTAAATATAAACAAAGACTTGAACATAGAAGAAAACTGCACCACAAGAAGATTCTTATTTGATTACAAAGCCATCAATGAGCTAAAATCCATGTCAACAAGCGATGAAACAAAACCTACACGATACCAAGTAGTATCTTCATTCATAACTAAACATATGATTATAGCAATCAAAGAAGAATCTTGTGACGAAACAAGGCCAACGGTTGCATTACACGTTGTGGACATGAGAAGAAGGATTGGGGAGCCTTTCTCAAAAGTTGCTATTGGAAATTTGTTGTGGCCTGCATTGGTTCTTGTTGAGGATGTCAACAAGAACACTAACATTATGGATTTGGTTGAAATTCTAAAAGAAGGACTCGGAAAGCTCACTAAGGATTTGTTTCTAAAACTGCAGAATGATCATAACTTTTTGTGGAGTGATGAGTGTGCAGAACTAATGCTTGAAGGTATAGCAGAAACTAACCCAATCTCCTTAGTGTTCACAAGTTGGGCTAATATGGGATTCAACATGGTGGATTTTGGTAGTGGAAAACCTTTGTGGCTAGCTCAAAGAGGAGGAACTAAAGAAACTATCCCAAACACTGTAATATTGATGGAAACAAGAGAGGGTATAGAGGCATGGATGTCAATGACAGAAAAACATATGACTATCTTGGAACATGATGTCGACTTCCTTCGATTTGCATTGCTTAATCCTAGTATTTTAACCTAA 1329 0.3792 MEISITSRETIKPSLPTSAECKTQKLCLFDVFQLNIYFPLILFYSKTTTLQGFSDVSTQLKKSLSEALTIFYPLGGRRSDYFSIDCNDEGAIYMEASVNTSMEVFLKPPKLEMLNQLLPCEPNKLHPHQEILPQLLVQVTIFQCGGIAIGLCNLHILLDAYSCSAFLKTWFAICKGSKEEISWPDFFSASSSFPPRNTTGVRAGMLNINKDLNIEENCTTRRFLFDYKAINELKSMSTSDETKPTRYQVVSSFITKHMIIAIKEESCDETRPTVALHVVDMRRRIGEPFSKVAIGNLLWPALVLVEDVNKNTNIMDLVEILKEGLGKLTKDLFLKLQNDHNFLWSDECAELMLEGIAETNPISLVFTSWANMGFNMVDFGSGKPLWLAQRGGTKETIPNTVILMETREGIEAWMSMTEKHMTILEHDVDFLRFALLNPSILT* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00953 442 Gene3D - 215 432 IPR023213 -
Lapu4g00953 442 Gene3D - 1 202 IPR023213 -
Lapu4g00953 442 Pfam Transferase family 1 430 - -
Lapu4g00953 442 PANTHER F21J9.9 4 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00953 Lapu-Chr4 24917735 24919063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00953 1 425 Monolignol Biosynthesis Gene Families AT5G48930 23.163 1.24e-18 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00953 - - gmx:102667966 719.539