Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00950 ATGCTGTCTCTGGATCTCTCGGTATCCTCAACTCTCACCAAATTCTCGCCTTTCAATATCAGTTCTAATAAACCAAACTCTTTCCCTTCCAAGGTTTCACCTTCCTCCAATGAATTCTCTCTCCTTTCTCTCTCCAACTCAGGAATTTGCAGGGCCAGTGAAGTTGTTGATTTGTTCCCAGCAGTGTCCCCCGAAATTATTGTCAGGGAGGCAAGGTTGGAGGACTATTGGGGAGTAGCAGAGACTCACTGCAAGCGCTTCTTCCCTGAATATTCTTTCCCATTAGATTTTGTGCTGAGGATGGACAGATTGGTGGTGGAGATTTTAGCAGCTTTGTTAACCGGATTCTTCAGGCCAAGAGACTGCAGAAGAGTCTGTTTGGTGGCTGTTATTGGCAGCTCACATGATGAATCCTTTTCACTTGGAAGTGAGGGTCACAAGATTAGTAGTTTTTATGGGAAATTCAGTCTCAACAAGGACTATGTGGTTGGTATATTAACAGTAGACAATAGTGCAGACGTTCTACCAAGAAAGGGGCCACGAAGACATAGAAGGACTGGAATTGCATACATATCAAACGTGGCTGTGCGGGAAAATTTTCAGAGGAAGGGAATAGCTAAAAAACTGGTAGAAAAGGCTGAGTCTCATGCCAGAAATTGGAGTTGTCGTGCTGTTGCATTGCATTGTGACGTGAACAACACTGTGGCCACAATGTTCTACAAAGGCCTAGGGTACAAATGTGTCATGGTTCCAGAAGGAGCAAAGTGGCCTCAACCAAGCACCTCACTAGATATGAGATTCAACTTCATGATGAAACTTCTAAAAGGTTCACCAGCTTCTGATTAG 846 0.4409 MLSLDLSVSSTLTKFSPFNISSNKPNSFPSKVSPSSNEFSLLSLSNSGICRASEVVDLFPAVSPEIIVREARLEDYWGVAETHCKRFFPEYSFPLDFVLRMDRLVVEILAALLTGFFRPRDCRRVCLVAVIGSSHDESFSLGSEGHKISSFYGKFSLNKDYVVGILTVDNSADVLPRKGPRRHRRTGIAYISNVAVRENFQRKGIAKKLVEKAESHARNWSCRAVALHCDVNNTVATMFYKGLGYKCVMVPEGAKWPQPSTSLDMRFNFMMKLLKGSPASD* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00950 281 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 61 248 IPR016181 -
Lapu4g00950 281 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 106 270 IPR000182 GO:0016747
Lapu4g00950 281 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 16 276 - -
Lapu4g00950 281 Gene3D - 61 265 - -
Lapu4g00950 281 Pfam Acetyltransferase (GNAT) family 162 245 IPR000182 GO:0016747
Lapu4g00950 281 CDD NAT_SF 181 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00950 Lapu-Chr4 24863102 24866307 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lapu4g00950 Acetyltransf_1 2.7e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00950 - - gmx:100803930 451.825