Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00939 ATGGCTAGGGTTAGTGGTTTGTTTTTGCTCTTGATTTCTTGCCTTCTATTGGCTTCTCAAACCCTTGTTGTCTCCTCTAGGACATTAGAAAAAAGACCACCCCTTGTTCCTGGACTATCGTGGAGTTACTATTTTCCTCTCGAATGTCCCAATCTTGAAAGGATTATAAGGATTAATTTGGAGAAAGCCTTCAAGAAGAATAGTGGATTAGCTCCTGGCATACTTCGACTCTTCTTCCATGACTGCTTTGCTAATGGTTGTGACGCGTCTATATTGTTGAATGCACCAGATGGAAACGATGAAAAGAGCCACCCTGCTAACATTGGTATAAGGCCAGAGGCTCTTGAAGCCATTGAAGAGCTTCGAAGGGTCATTTACAAACAGTGTCTACCAGTTGTTTCTTGTTCAGACATCCTTGTTGTTGCAGCACGTGAAGCTGTTCGCCAATTGGGAGGCCCAGATTTCGATGTGCCCCTTGGAAGGAAAGACAGCCTTACATTCGACCTAGCCGGACCTAATAACCTCCCGCCGCCATTCTTCCGAACCGACCAGCTCCTAGGAGTCTTCGGAGAGCGAAACTTCGACGCCACCGATGTGGTCGCGCTCTCTGGCGCTCACACCTACGGTAGGGCTCACTGCTCCTCTCTGGTCAACAGAACCATCGAATCTGACCCACCCATCGACCCGGACTTCAAGAACAAGCTGGTGGCCACGTGTCCGACGCCGGGGTCATCGAACACGGTGGACCTGGACGTGCGCACTCCGACCAAGTTCGACAACATGTACTACATCAACCTGCTGAACCGGCAGGGTGTGTTCACCTCGGACCAGGACCTCGCGAGCCACCCGCAGACGAAGGAGATCGTGAACAAGTTCGCCTCCAACCAGAAGGAGTTCTTCGATAGCTTCGCGGATGCGTTTGTGAAGGTGAGCCAGATCGACGTCATCACCAGTCGCCAGGGGAAAGGGGAGATTCGCGACAGGTGCTTCGTGGCCAATAGTAAGAAGGTTTCGGCGGAGGCTGTGGTGGCGGAAGTGGTGGAGTTGGCCGAGGCCATTTGA 1062 0.5188 MARVSGLFLLLISCLLLASQTLVVSSRTLEKRPPLVPGLSWSYYFPLECPNLERIIRINLEKAFKKNSGLAPGILRLFFHDCFANGCDASILLNAPDGNDEKSHPANIGIRPEALEAIEELRRVIYKQCLPVVSCSDILVVAAREAVRQLGGPDFDVPLGRKDSLTFDLAGPNNLPPPFFRTDQLLGVFGERNFDATDVVALSGAHTYGRAHCSSLVNRTIESDPPIDPDFKNKLVATCPTPGSSNTVDLDVRTPTKFDNMYYINLLNRQGVFTSDQDLASHPQTKEIVNKFASNQKEFFDSFADAFVKVSQIDVITSRQGKGEIRDRCFVANSKKVSAEAVVAEVVELAEAI* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00939 353 ProSitePatterns Peroxidases active site signature. 71 82 IPR019794 GO:0004601
Lapu4g00939 353 Gene3D - 44 329 - -
Lapu4g00939 353 FunFam Peroxidase 176 310 - -
Lapu4g00939 353 ProSiteProfiles Plant heme peroxidase family profile. 38 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu4g00939 353 ProSitePatterns Peroxidases proximal heme-ligand signature. 198 208 IPR019793 -
Lapu4g00939 353 Gene3D Peroxidase, domain 2 177 311 - -
Lapu4g00939 353 PRINTS Plant peroxidase signature 49 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g00939 353 PRINTS Plant peroxidase signature 132 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g00939 353 PRINTS Plant peroxidase signature 151 166 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g00939 353 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g00939 353 PRINTS Plant peroxidase signature 73 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g00939 353 PRINTS Plant peroxidase signature 197 209 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g00939 353 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g00939 353 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g00939 353 PANTHER - 16 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g00939 353 Pfam Peroxidase 59 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu4g00939 353 SUPERFAMILY Heme-dependent peroxidases 9 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lapu4g00939 353 CDD secretory_peroxidase 38 331 IPR033905 GO:0004601|GO:0042744
Lapu4g00939 353 PRINTS Haem peroxidase superfamily signature 151 163 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu4g00939 353 PRINTS Haem peroxidase superfamily signature 133 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu4g00939 353 PRINTS Haem peroxidase superfamily signature 71 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu4g00939 353 PRINTS Haem peroxidase superfamily signature 198 213 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu4g00939 353 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu4g00939 353 FunFam Peroxidase 43 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00939 Lapu-Chr4 24661557 24663196 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00939 8 350 Peroxidase AT1G71695 47.126 6.11e-102 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00939 K00430 - gmx:100795412 466.077